Evidence map›Paper›PMID 34778961›Full record

ArticlePlant, cell & environment2022

cis-prenyltransferase 3 and α/β-hydrolase are new determinants of dolichol accumulation in Arabidopsis.

Katarzyna Gawarecka, Joanna Siwinska, Jaroslaw Poznanski, Agnieszka Onysk, Przemyslaw Surowiecki, Karolina Sztompka, Liliana Surmacz, Ji Hoon Ahn, Arthur Korte, Ewa Swiezewska and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant, cell & environment, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. The Alpha/Beta-Hydrolase Fold Superfamily inInternational journal of molecular sciences · 2025
    Article
  7. Article
  8. The cis-prenyltransferase protein family in Taraxacum koksaghyz.The Plant journal : for cell and molecular biology · 2025
    Article
  9. Article
  10. Plant biochemical genetics in the multiomics era.Journal of experimental botany · 2023
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Katarzyna GawareckaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland.
Joanna SiwinskaIntercollegiate Faculty of Biotechnology of University of Gdansk and Medical University of Gdansk, University of Gdansk, Gdansk, Poland.
Jaroslaw PoznanskiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland.
Agnieszka OnyskInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland.
Przemyslaw SurowieckiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland.
Karolina SztompkaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland.
Liliana SurmaczInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland.
Ji Hoon AhnDepartment of Life Sciences, Korea University, Seoul, Korea.ORCID 0000-0003-0347-3922
Arthur KorteCenter for Computational and Theoretical Biology, University of Wurzburg, Wurzburg, Germany.
Ewa SwiezewskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland.ORCID 0000-0002-3439-8948
Anna IhnatowiczIntercollegiate Faculty of Biotechnology of University of Gdansk and Medical University of Gdansk, University of Gdansk, Gdansk, Poland.ORCID 0000-0001-7883-5954
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLKorea University · KRUniversity of Gdańsk · PLUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dolichols (Dols), ubiquitous components of living organisms, are indispensable for cell survival. In plants, as well as other eukaryotes, Dols are crucial for post-translational protein glycosylation, aberration of which leads to fatal metabolic disorders in humans and male sterility in plants. Until now, the mechanisms underlying Dol accumulation remain elusive. In this study, we have analysed the natural variation of the accumulation of Dols and six other isoprenoids among more than 120 Arabidopsis thaliana accessions. Subsequently, by combining QTL and GWAS approaches, we have identified several candidate genes involved in the accumulation of Dols, polyprenols, plastoquinone and phytosterols. The role of two genes implicated in the accumulation of major Dols in Arabidopsis-the AT2G17570 gene encoding a long searched for cis-prenyltransferase (CPT3) and the AT1G52460 gene encoding an α/β-hydrolase-is experimentally confirmed. These data will help to generate Dol-enriched plants which might serve as a remedy for Dol-deficiency in humans.

Indexed as

ArabidopsisArabidopsis ProteinsDolicholsHydrolasesTransferasesArabidopsis Proteinscis-prenyl transferaseDolicholsHydrolasesTransferasesdolicholGWASisoprenoidnatural variationplant-environment interactionspolyprenolQTL mappingsecondary metabolism

Identifiers

PMID34778961
PMCPMC9300173
OpenAlexW3211695489

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.