Evidence map›Paper›PMID 34815424›Full record

ArticleNature communications2021

Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance.

Patrick R Smith, Sarah Loerch, Nikesh Kunder, Alexander D Stanowick, Tzu-Fang Lou, Zachary T Campbell

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. eLife · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Patrick R Smith *The University of Texas at Dallas, Department of Biological Sciences, Richardson, TX, USA.ORCID http://orcid.org/0000-0001-8713-5386
Sarah Loerch *Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-1731-516X
Nikesh KunderThe University of Texas at Dallas, Department of Biological Sciences, Richardson, TX, USA.
Alexander D StanowickThe University of Texas at Dallas, Department of Biological Sciences, Richardson, TX, USA.ORCID http://orcid.org/0000-0002-1094-0296
Tzu-Fang LouThe University of Texas at Dallas, Department of Biological Sciences, Richardson, TX, USA.
Zachary T CampbellThe University of Texas at Dallas, Department of Biological Sciences, Richardson, TX, USA. Zachary.Campbell@utdallas.edu.ORCID http://orcid.org/0000-0002-3768-6996
The University of Texas at Dallas · USHoward Hughes Medical Institute · US

Funding

Profiling Translation in Nociceptor PlasticityR01NS114018 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI Zachary Campbell · 2020 to 2026
$3.2M
3’ End Regulation in Nociceptor PlasticityR01NS100788 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI CAMPBELL, ZACHARY · 2017 to 2021
$2.0M
NINDS NIH HHS R01 NS100788NINDS NIH HHS R01 NS114018
6 · The paper itself

Abstract

Processing bodies (p-bodies) are a prototypical phase-separated RNA-containing granule. Their abundance is highly dynamic and has been linked to translation. Yet, the molecular mechanisms responsible for coordinate control of the two processes are unclear. Here, we uncover key roles for eEF2 kinase (eEF2K) in the control of ribosome availability and p-body abundance. eEF2K acts on a sole known substrate, eEF2, to inhibit translation. We find that the eEF2K agonist nelfinavir abolishes p-bodies in sensory neurons and impairs translation. To probe the latter, we used cryo-electron microscopy. Nelfinavir stabilizes vacant 80S ribosomes. They contain SERBP1 in place of mRNA and eEF2 in the acceptor site. Phosphorylated eEF2 associates with inactive ribosomes that resist splitting in vitro. Collectively, the data suggest that eEF2K defines a population of inactive ribosomes resistant to recycling and protected from degradation. Thus, eEF2K activity is central to both p-body abundance and ribosome availability in sensory neurons.

Indexed as

AnimalsCell Line, TumorCryoelectron MicroscopyElongation Factor 2 KinaseGanglia, SpinalHumansMaleMiceMice, KnockoutNelfinavirPeptide Elongation Factor 2PhosphorylationPrimary Cell CultureProcessing BodiesProtein BiosynthesisRibosomesEEF2K protein, humanEef2k protein, mouseElongation Factor 2 KinaseNelfinavirPeptide Elongation Factor 2

Identifiers

PMID34815424
PMCPMC8611098
OpenAlexW3215812299

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.