Evidence map›Paper›PMID 34824452›Full record

ReviewNature reviews. Molecular cell biology2022

Structures and functions of coronavirus replication-transcription complexes and their relevance for SARS-CoV-2 drug design.

Brandon Malone, Nadya Urakova, Eric J Snijder, Elizabeth A Campbell

Open access · hybridAbstract readReview
In one paragraph

Review in Nature reviews. Molecular cell biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 321 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
321citing papers in PubMed, 1 pooled it
23.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

321 citing papers in PubMed, 1 synthesis or guideline pooled it, 507 citations in OpenAlex.

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261 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Brandon Malone *Laboratory of Molecular Biophysics, The Rockefeller University, New York, NY, USA.
Nadya Urakova *Department of Medical Microbiology, Leiden University Medical Center, Leiden, Netherlands.
Eric J SnijderDepartment of Medical Microbiology, Leiden University Medical Center, Leiden, Netherlands. e.j.snijder@lumc.nl.ORCID http://orcid.org/0000-0003-3297-2309
Elizabeth A CampbellLaboratory of Molecular Biophysics, The Rockefeller University, New York, NY, USA. elizabeth.campbell@rockefeller.edu.ORCID http://orcid.org/0000-0002-1332-128X
Leiden University Medical Center · NLRockefeller University · US

Funding

Structure, function, and inhibition of the SARS-CoV-2 replication-transcription complexR01AI161278 · NIAID · ROCKEFELLER UNIVERSITY · PI Seth A. Darst · 2021 to 2026
$3.9M
Structure/function analyses of essential mycobacterial transcription regulatorsR01GM114450 · NIGMS · ROCKEFELLER UNIVERSITY · PI CAMPBELL, ELIZABETH A · 2015 to 2023
$3.4M
NIAID NIH HHS 1-R01 AI161278NIAID NIH HHS R01 AI161278NIGMS NIH HHS 2-R01 GM114450NIGMS NIH HHS R01 GM114450
6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has killed millions of people and continues to cause massive global upheaval. Coronaviruses are positive-strand RNA viruses with an unusually large genome of ~30 kb. They express an RNA-dependent RNA polymerase and a cohort of other replication enzymes and supporting factors to transcribe and replicate their genomes. The proteins performing these essential processes are prime antiviral drug targets, but drug discovery is hindered by our incomplete understanding of coronavirus RNA synthesis and processing. In infected cells, the RNA-dependent RNA polymerase must coordinate with other viral and host factors to produce both viral mRNAs and new genomes. Recent research aiming to decipher and contextualize the structures, functions and interplay of the subunits of the SARS-CoV-2 replication and transcription complex proteins has burgeoned. In this Review, we discuss recent advancements in our understanding of the molecular basis and complexity of the coronavirus RNA-synthesizing machinery. Specifically, we outline the mechanisms and regulation of RNA translation, replication and transcription. We also discuss the composition of the replication and transcription complexes and their suitability as targets for antiviral therapy.

Indexed as

Drug DesignTranscription, GeneticAnimalsAntiviral AgentsHumansRNA, ViralSARS-CoV-2Virus ReplicationAntiviral AgentsRNA, Viral

Identifiers

PMID34824452
PMCPMC8613731
OpenAlexW3217300869

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.