Evidence map›Paper›PMID 34831190›Full record

ArticleCells2021

Transcriptome Profiling of Dysregulated GPCRs Reveals Overlapping Patterns across Psychiatric Disorders and Age-Disease Interactions.

Roudabeh Vakil Monfared, Wedad Alhassen, Tri Minh Truong, Michael Angelo Maglalang Gonzales, Vincent Vachirakorntong, Siwei Chen, Pierre Baldi, Olivier Civelli, Amal Alachkar

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Single-Cell RNA-Seq Reveals Coronary Heterogeneity and Identifies CD133Arteriosclerosis, thrombosis, and vascular biology · 2024
    Article
  10. The psychosis risk factorbioRxiv : the preprint server for biology · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Roudabeh Vakil MonfaredDepartment of Pharmaceutical Sciences, School of Pharmacy, University of California Irvine, Irvine, CA 92697, USA.
Wedad AlhassenDepartment of Pharmaceutical Sciences, School of Pharmacy, University of California Irvine, Irvine, CA 92697, USA.
Tri Minh TruongDepartment of Pharmaceutical Sciences, School of Pharmacy, University of California Irvine, Irvine, CA 92697, USA.
Michael Angelo Maglalang GonzalesDepartment of Pharmaceutical Sciences, School of Pharmacy, University of California Irvine, Irvine, CA 92697, USA.
Vincent VachirakorntongDepartment of Pharmaceutical Sciences, School of Pharmacy, University of California Irvine, Irvine, CA 92697, USA.
Siwei ChenDepartment of Computer Science, School of Information and Computer Sciences, University of California Irvine, Irvine, CA 92697, USA.
Pierre BaldiDepartment of Computer Science, School of Information and Computer Sciences, University of California Irvine, Irvine, CA 92697, USA.ORCID 0000-0001-8752-4664
Olivier CivelliDepartment of Pharmaceutical Sciences, School of Pharmacy, University of California Irvine, Irvine, CA 92697, USA.
Amal AlachkarDepartment of Pharmaceutical Sciences, School of Pharmacy, University of California Irvine, Irvine, CA 92697, USA.
University of California, Irvine · US

Funding

Bioinformatics Tools for Circadian BiologyR01GM123558 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Pierre Baldi · 2017 to 2026
$2.4M
The roles of neuronal primary cilia in Alzheimer's diseaseR01HL147311 · NHLBI · CHAPMAN UNIVERSITY · PI NAULI, SURYA · 2020 to 2023
$2.1M
NHLBI NIH HHS R01 HL147311NIGMS NIH HHS R01 GM123558NIH HHS GM123558
6 · The paper itself

Abstract

G-protein-coupled receptors (GPCRs) play an integral role in the neurobiology of psychiatric disorders. Almost all neurotransmitters involved in psychiatric disorders act through GPCRs, and GPCRs are the most common targets of therapeutic drugs currently used in the treatment of psychiatric disorders. However, the roles of GPCRs in the etiology and pathophysiology of psychiatric disorders are not fully understood. Using publically available datasets, we performed a comprehensive analysis of the transcriptomic signatures of G-protein-linked signaling across the major psychiatric disorders: autism spectrum disorder (ASD), schizophrenia (SCZ), bipolar disorder (BP), and major depressive disorder (MDD). We also used the BrainSpan transcriptomic dataset of the developing human brain to examine whether GPCRs that exhibit chronological age-associated expressions have a higher tendency to be dysregulated in psychiatric disorders than age-independent GPCRs. We found that most GPCR genes were differentially expressed in the four disorders and that the GPCR superfamily as a gene cluster was overrepresented in the four disorders. We also identified a greater amplitude of gene expression changes in GPCRs than other gene families in the four psychiatric disorders. Further, dysregulated GPCRs overlapped across the four psychiatric disorders, with SCZ exhibiting the highest overlap with the three other disorders. Finally, the results revealed a greater tendency of age-associated GPCRs to be dysregulated in ASD than random GPCRs. Our results substantiate the central role of GPCR signaling pathways in the etiology and pathophysiology of psychiatric disorders. Furthermore, our study suggests that common GPCRs' signaling may mediate distinct phenotypic presentations across psychiatric disorders. Consequently, targeting these GPCRs could serve as a common therapeutic strategy to treat specific clinical symptoms across psychiatric disorders.

Indexed as

Gene Expression ProfilingGene Expression RegulationAgingAutism Spectrum DisorderBipolar DisorderGTP-Binding ProteinsHumansLigandsMajor Depressive DisorderMental DisordersMultigene FamilyNeuropeptidesNeurotransmitter AgentsReceptors, G-Protein-CoupledSchizophreniaSignal TransductionGTP-Binding ProteinsLigandsNeuropeptidesNeurotransmitter AgentsReceptors, G-Protein-Coupledage-dependent expressionGPCRspsychiatric disorderstranscriptomics

Identifiers

PMID34831190
PMCPMC8616384
OpenAlexW3210398794

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.