Evidence map›Paper›PMID 34834978›Full record

ReviewViruses2021

RNA Binding Proteins as Pioneer Determinants of Infection: Protective, Proviral, or Both?

Samantha Lisy, Katherine Rothamel, Manuel Ascano

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
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  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. RNA Metabolism in T Lymphocytes.Immune network · 2022
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Samantha LisyDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.ORCID 0000-0002-9161-4002
Katherine RothamelDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.
Manuel AscanoDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.ORCID 0000-0002-9370-5493
Vanderbilt University · US

Funding

TRAINING PROGRAM IN CELLULAR, BIOCHEMICAL, &MOLECULAR ST32GM008554 · NIGMS · VANDERBILT UNIVERSITY · PI PATTON, JAMES G. · 1995 to 2020
$7.4M
Chemistry-Biology Interface Training GrantT32GM065086 · NIGMS · VANDERBILT UNIVERSITY · PI BACHMANN, BRIAN O, SULIKOWSKI, GARY ALLEN · 2002 to 2022
$7.0M
Deciphering Post-transcriptional gene regulatory networks in cellular stress and innate immunityR35GM119569 · NIGMS · VANDERBILT UNIVERSITY · PI ASCANO, MANUEL · 2016 to 2025
$4.0M
NIGMS NIH HHS 1R35GM119569-01NIGMS NIH HHS 5T32GM008554NIGMS NIH HHS 5T32GM065086-14NIGMS NIH HHS R35 GM119569
6 · The paper itself

Abstract

As the first intracellular host factors that directly interact with the genomes of RNA viruses, RNA binding proteins (RBPs) have a profound impact on the outcome of an infection. Recent discoveries brought about by new methodologies have led to an unprecedented ability to peer into the earliest events between viral RNA and the RBPs that act upon them. These discoveries have sparked a re-evaluation of current paradigms surrounding RBPs and post-transcriptional gene regulation. Here, we highlight questions that have bloomed from the implementation of these novel approaches. Canonical RBPs can impact the fates of both cellular and viral RNA during infection, sometimes in conflicting ways. Noncanonical RBPs, some of which were first characterized via interactions with viral RNA, may encompass physiological roles beyond viral pathogenesis. We discuss how these RBPs might discriminate between an RNA of either cellular or viral origin and thus exert either pro- or antiviral effects-which is a particular challenge as viruses contain mechanisms to mimic molecular features of cellular RNA.

Indexed as

Gene Expression RegulationHost-Pathogen InteractionsHumansImmunity, InnateProvirusesRNA-Binding ProteinsRNA, MessengerRNA, ViralRNA VirusesViral ProteinsRNA-Binding ProteinsRNA, MessengerRNA, ViralViral Proteinshost vs. pathogeninnate immunitypost-transcriptional gene regulationRNA binding proteinsRNA sensingviral infection

Identifiers

PMID34834978
PMCPMC8625426
OpenAlexW3209217725

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.