Evidence map›Paper›PMID 34856929›Full record

ArticleBMC genomics2021

Identification of proteins associated with bast fiber growth of ramie by differential proteomic analysis.

Fu Li, Zheng Zeng, Renyan Huang, Yanzhou Wang, Touming Liu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Antimicrobial Properties of Plant Fibers.Molecules (Basel, Switzerland) · 2022
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Fu LiInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Zheng ZengInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Renyan HuangHunan Institute of Plant Protection, Changsha, 410205, China.
Yanzhou WangInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Touming LiuInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China. liutouming@caas.cn.
Chinese Academy of Agricultural Sciences · CNInstitute of Bast Fiber Crops · CNInstitute of Plant Protection · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRamie is an important fiber-producing crop in China, and its fibers are widely used as textile materials. Fibers contain specialized secondary cellular walls that are mainly composed of cellulose, hemicelluloses, and lignin. Understanding the mechanism underlying the secondary wall biosynthesis of fibers will benefit the improvement of fiber yield and quality in ramie.

resultsHere, we performed a proteomic analysis of the bark from the top and middle parts of the stem, where fiber growth is at different stages. We identified 6971 non-redundant proteins from bast bark. Proteomic comparison revealed 983 proteins with differential expression between the two bark types. Of these 983 proteins, 46 were identified as the homolog of known secondary wall biosynthetic proteins of Arabidopsis, indicating that they were potentially associated with fiber growth. Then, we proposed a molecular model for the secondary wall biosynthesis of ramie fiber. Furthermore, interaction analysis of 46 candidate proteins revealed two interacting networks that consisted of eight cellulose biosynthetic enzymes and seven lignin biosynthetic proteins, respectively.

conclusionThis study sheds light on the proteomic basis underlying bast fiber growth in ramie, and the identification of many candidates associated with fiber growth provides important basis for understanding the fiber growth in this crop.

Indexed as

BoehmeriaCelluloseLigninPlant ProteinsProteomicsCelluloseLigninPlant ProteinsDifferential expressionfiber growthProteomeRamieSecondary wall biosynthesis

Identifiers

PMID34856929
PMCPMC8638140
OpenAlexW3216705571

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.