Evidence map›Paper›PMID 34878832›Full record

ArticleScience advances2021

Temporal profiling of therapy resistance in human medulloblastoma identifies novel targetable drivers of recurrence.

David Bakhshinyan, Ashley A Adile, Jeff Liu, William D Gwynne, Yujin Suk, Stefan Custers, Ian Burns, Mohini Singh, Nicole McFarlane, Minomi K Subapanditha and 13 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Mechanistic insights into medulloblastoma relapse.Pharmacology & therapeutics · 2024
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Dynamic profiling of medulloblastoma surfaceome.Acta neuropathologica communications · 2023
    Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 1 country.

David BakhshinyanMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0002-1917-7354
Ashley A AdileMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Jeff LiuThe Donnelly Centre, University of Toronto, Toronto, ON, Canada.
William D GwynneMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0001-5745-5637
Yujin SukMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Stefan CustersMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Ian BurnsMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0001-5634-939X
Mohini SinghMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0003-4998-9676
Nicole McFarlaneMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Minomi K SubapandithaMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Maleeha A QaziMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0001-8350-1094
Parvez VoraMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Michelle M Kameda-SmithMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0003-0904-9946
Neil SavageMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Kim L DesmondDepartment of Psychology, Neuroscience and Behaviour, McMaster University, Hamilton, ON, Canada.ORCID 0000-0003-0626-9310
Nazanin TatariMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Damian TranMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0001-9397-6456
Mathieu SeyfridMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0002-0632-8870
Kristin HopeMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0003-1449-4948
Nicholas A BockDepartment of Psychology, Neuroscience and Behaviour, McMaster University, Hamilton, ON, Canada.ORCID 0000-0002-4075-0928
Chitra VenugopalMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.
Gary D BaderThe Donnelly Centre, University of Toronto, Toronto, ON, Canada.ORCID 0000-0003-0185-8861
Sheila K SinghMcMaster Stem Cell and Cancer Research Institute, McMaster University, Hamilton, ON, Canada.ORCID 0000-0003-1272-5300
McMaster University · CAMount Sinai Hospital · CAUniversity of Toronto · CA

Funding

TR&D 3 - Network Guided Machine LearningP41GM103504 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IDEKER, TREY · 2012 to 2024
$17.3M
Cytoscape: A Modeling Platform for Biomolecular NetworksR01HG009979 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IDEKER, TREY · 2017 to 2021
$3.5M
NHGRI NIH HHS R01 HG009979
6 · The paper itself

Abstract

Medulloblastoma (MB) remains a leading cause of cancer-related mortality among children. The paucity of MB samples collected at relapse has hindered the functional understanding of molecular mechanisms driving therapy failure. New models capable of accurately recapitulating tumor progression in response to conventional therapeutic interventions are urgently needed. In this study, we developed a therapy-adapted PDX MB model that has a distinct advantage of generating human MB recurrence. The comparative gene expression analysis of MB cells collected throughout therapy led to identification of genes specifically up-regulated after therapy, including one previously undescribed in the setting of brain tumors, bactericidal/permeability-increasing fold-containing family B member 4 (

Identifiers

PMID34878832
PMCPMC8654291
OpenAlexW4200540415

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.