Evidence map›Paper›PMID 34911762›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Low-energy electron holography imaging of conformational variability of single-antibody molecules from electrospray ion beam deposition.

Hannah Ochner, Sven Szilagyi, Sabine Abb, Joseph Gault, Carol V Robinson, Luigi Malavolti, Stephan Rauschenbach, Klaus Kern

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Four IgG Antibodies and Protein G Are Shapeshifters.International journal of molecular sciences · 2026
    Article
  2. Article
  3. Article
  4. Mass spectrometers as cryoEM grid preparation instruments.Current opinion in structural biology · 2023
    Review
  5. Charting the molecular landscape of the cell.Structure (London, England : 1993) · 2023
    Review
  6. Article
  7. Article
  8. Dissecting the structural heterogeneity of proteins by native mass spectrometry.Protein science : a publication of the Protein Society · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Hannah OchnerNanoscale Science Department, Max Planck Institute for Solid State Research, 70569 Stuttgart, Germany.ORCID 0000-0003-2750-2775
Sven SzilagyiNanoscale Science Department, Max Planck Institute for Solid State Research, 70569 Stuttgart, Germany.ORCID 0000-0001-9767-587X
Sabine AbbNanoscale Science Department, Max Planck Institute for Solid State Research, 70569 Stuttgart, Germany.
Joseph GaultDepartment of Chemistry, University of Oxford, Oxford OX1 3TA, United Kingdom.ORCID 0000-0001-7686-2983
Carol V RobinsonDepartment of Chemistry, University of Oxford, Oxford OX1 3TA, United Kingdom.ORCID 0000-0001-7829-5505
Luigi MalavoltiNanoscale Science Department, Max Planck Institute for Solid State Research, 70569 Stuttgart, Germany; l.malavolti@fkf.mpg.de.ORCID 0000-0003-4644-7644
Stephan RauschenbachNanoscale Science Department, Max Planck Institute for Solid State Research, 70569 Stuttgart, Germany.
Klaus KernNanoscale Science Department, Max Planck Institute for Solid State Research, 70569 Stuttgart, Germany.
Max Planck Institute for Solid State Research · DEUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Imaging of proteins at the single-molecule level can reveal conformational variability, which is essential for the understanding of biomolecules. To this end, a biologically relevant state of the sample must be retained during both sample preparation and imaging. Native electrospray ionization (ESI) can transfer even the largest protein complexes into the gas phase while preserving their stoichiometry and overall shape. High-resolution imaging of protein structures following native ESI is thus of fundamental interest for establishing the relation between gas phase and solution structure. Taking advantage of low-energy electron holography's (LEEH) unique capability of imaging individual proteins with subnanometer resolution, we investigate the conformational flexibility of Herceptin, a monoclonal IgG antibody, deposited by native electrospray mass-selected ion beam deposition (ES-IBD) on graphene. Images reconstructed from holograms reveal a large variety of conformers. Some of these conformations can be mapped to the crystallographic structure of IgG, while others suggest that a compact, gas-phase-related conformation, adopted by the molecules during ES-IBD, is retained. We can steer the ratio of those two types of conformations by changing the landing energy of the protein on the single-layer graphene surface. Overall, we show that LEEH can elucidate the conformational heterogeneity of inherently flexible proteins, exemplified here by IgG antibodies, and thereby distinguish gas-phase collapse from rearrangement on surfaces.

Indexed as

HolographyImmunoglobulin GProtein ConformationSingle Molecule ImagingSpectrometry, Mass, Electrospray IonizationImmunoglobulin Glow-energy electron holographynative electrospray ion beam depositionsingle-molecule imaging

Identifiers

PMID34911762
PMCPMC8713884
OpenAlexW4200604190

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.