Evidence map›Paper›PMID 34919148›Full record

ArticleDisease models & mechanisms2022

A protein-trap allele reveals roles for Drosophila ATF4 in photoreceptor degeneration, oogenesis and wing development.

Deepika Vasudevan, Hidetaka Katow, Huai-Wei Huang, Grace Tang, Hyung Don Ryoo

Open access · goldAbstract read
In one paragraph

Article in Disease models & mechanisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Deepika VasudevanDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY 10016, USA.ORCID 0000-0003-1930-3549
Hidetaka KatowDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Huai-Wei HuangDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Grace TangDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Hyung Don RyooDepartment of Cell Biology, New York University Grossman School of Medicine, New York, NY 10016, USA.ORCID 0000-0002-1046-535X
New York University · USUniversity of Pittsburgh · US

Funding

Resource Project CoreU41HG000739 · NHGRI · HARVARD UNIVERSITY · PI PERRIMON, NORBERT · 2014 to 2022
$32.3M
Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
DROSOPHILA GENOMICS RESOURCE CENTERP40OD010949 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Andrew Zelhof · 2012 to 2026
$9.4M
Unfolded Protein Response in Eye Development and DiseaseR01EY020866 · NEI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HYUNG D RYOO · 2010 to 2026
$6.9M
Translation control of stress response and innate immunityR01GM125954 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI RYOO, HYUNG D · 2018 to 2021
$1.4M
ER stress-induced translational regulation in retinal degenerationR00EY029013 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VASUDEVAN, DEEPIKA · 2021 to 2023
$724k
ER stress-induced translational regulation in retinal degenerationK99EY029013 · NEI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI VASUDEVAN, DEEPIKA · 2018 to 2020
$254k
NEI NIH HHS K99 EY029013NEI NIH HHS R00 EY029013NEI NIH HHS R01 EY020866NHGRI NIH HHS U41 HG000739NIGMS NIH HHS R01 GM125954NIH HHS P40 OD010949NIH HHS P40 OD018537
6 · The paper itself

Abstract

Metazoans have evolved various quality control mechanisms to cope with cellular stress inflicted by external and physiological conditions. ATF4 is a major effector of the integrated stress response, an evolutionarily conserved pathway that mediates adaptation to various cellular stressors. Loss of function of Drosophila ATF4, encoded by the gene cryptocephal (crc), results in lethality during pupal development. The roles of crc in Drosophila disease models and in adult tissue homeostasis thus remain poorly understood. Here, we report that a protein-trap Minos-mediated integration cassette insertion in the crc locus generates a Crc-GFP fusion protein that allows visualization of Crc activity in vivo. This allele also acts as a hypomorphic mutant that uncovers previously unknown roles for crc. Specifically, the crc protein-trap line shows Crc-GFP induction in a Drosophila model for retinitis pigmentosa. This crc allele renders flies more vulnerable to amino acid deprivation and age-dependent retinal degeneration. These mutants also show defects in wing veins and oocyte maturation. Together, our data reveal previously unknown roles for crc in development, cellular homeostasis and photoreceptor survival. This article has an associated First Person interview with the first author of the paper.

Indexed as

Drosophila ProteinsRetinal DegenerationActivating Transcription Factor 4AllelesAnimalsDrosophilaHumansOogenesisActivating Transcription Factor 4ATF4 protein, humanDrosophila ProteinsadRPATF4CrcER stressIntegrated stress responseRetinal degenerationRetinitis pigmentosa

Identifiers

PMID34919148
PMCPMC8938396
OpenAlexW4200275325

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.