Evidence map›Paper›PMID 34964942›Full record

ArticleJournal of microbiology (Seoul, Korea)2022

Assessment of Cre-lox and CRISPR-Cas9 as tools for recycling of multiple-integrated selection markers in Saccharomyces cerevisiae.

Hye Yun Moon, Gyu Hun Sim, Hyeon Jin Kim, Keunpil Kim, Hyun Ah Kang

Abstract read
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In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hye Yun Moon *Department of Life Science, College of Natural Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
Gyu Hun Sim *Department of Life Science, College of Natural Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
Hyeon Jin KimDepartment of Life Science, College of Natural Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
Keunpil KimDepartment of Life Science, College of Natural Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
Hyun Ah KangDepartment of Life Science, College of Natural Science, Chung-Ang University, Seoul, 06974, Republic of Korea. hyunkang@cau.ac.kr.
Chung-Ang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We evaluated the Cre-lox and CRISPR-Cas9 systems as marker-recycling tools in Saccharomyces cerevisiae recombinants containing multiple-integrated expression cassettes. As an initial trial, we constructed rDNA-nontranscribed spacer- or Ty4-based multiple integration vectors containing the URA3 marker flanked by the loxP sequence. Integrants harboring multiple copies of tHMG1 and NNV-CP expression cassettes were obtained and subsequently transformed with the Cre plasmid. However, the simultaneous pop-out of the expression cassettes along with the URA3 marker hampered the use of Cre-lox as a marker-recycling tool in multiple integrants. As an alternative, we constructed a set of CRISPR-Cas9-gRNA vectors containing gRNA targeted to auxotrophic marker genes. Transformation of multiple integrants of tHMG1 and NNV-CP cassettes by the Cas9-gRNA vector in the presence of the URA3 (stop) donor DNA fragments generated the Ura

Indexed as

CRISPR-Cas SystemsGenetic MarkersIntegrasesPlasmidsRNA, Guide, CRISPR-Cas SystemsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCre recombinaseGenetic MarkersIntegrasesRNA, Guide, CRISPR-Cas SystemsSaccharomyces cerevisiae ProteinsCre-loxCRISPR-Cas9marker-recyclingmultiple integrationSaccharomyces cerevisiae

Identifiers

PMID34964942
OpenAlexW4200068902

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.