Evidence map›Paper›PMID 35027552›Full record

ArticleNature communications2022

Genomic loci mispositioning in Tmem120a knockout mice yields latent lipodystrophy.

Rafal Czapiewski, Dzmitry G Batrakou, Jose I de Las Heras, Roderick N Carter, Aishwarya Sivakumar, Magdalena Sliwinska, Charles R Dixon, Shaun Webb, Giovanna Lattanzi, Nicholas M Morton and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Rafal CzapiewskiInstitute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID http://orcid.org/0000-0003-0211-8435
Dzmitry G BatrakouInstitute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.
Jose I de Las HerasInstitute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.
Roderick N CarterMolecular Metabolism Group, University/BHF Centre for Cardiovascular Science, Queen's Medical Research Institute, University of Edinburgh, Edinburgh, EH16 4TJ, UK.
Aishwarya SivakumarInstitute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.
Magdalena SliwinskaInstitute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.
Charles R DixonInstitute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID http://orcid.org/0000-0001-9565-9710
Shaun WebbWellcome Centre for Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.
Giovanna LattanziCNR - National Research Council of Italy, Institute of Molecular Genetics "Luigi Luca Cavalli-Sforza", Unit of Bologna, Bologna, 40136, Italy.
Nicholas M MortonMolecular Metabolism Group, University/BHF Centre for Cardiovascular Science, Queen's Medical Research Institute, University of Edinburgh, Edinburgh, EH16 4TJ, UK.ORCID http://orcid.org/0000-0001-8218-8462
Eric C SchirmerInstitute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK. e.schirmer@ed.ac.uk.ORCID http://orcid.org/0000-0003-2635-1338
University of Edinburgh · GBThe Queen's Medical Research Institute · GBWellcome Centre for Cell Biology · GBIstituto Ortopedico Rizzoli · IT

Funding

Medical Research Council MR/R018073Medical Research Council MR/R018073/1Wellcome TrustWellcome Trust 092076Wellcome Trust 095209Wellcome Trust 100981/Z/13/Z
6 · The paper itself

Abstract

Little is known about how the observed fat-specific pattern of 3D-spatial genome organisation is established. Here we report that adipocyte-specific knockout of the gene encoding nuclear envelope transmembrane protein Tmem120a disrupts fat genome organisation, thus causing a lipodystrophy syndrome. Tmem120a deficiency broadly suppresses lipid metabolism pathway gene expression and induces myogenic gene expression by repositioning genes, enhancers and miRNA-encoding loci between the nuclear periphery and interior. Tmem120a

Indexed as

Genetic Loci3T3-L1 CellsAdipocytesAdipogenesisAdipose Tissue, BrownAdipose Tissue, WhiteAnimalsBody WeightCarbohydrate MetabolismDiet, High-FatEnhancer Elements, GeneticFemaleGene Expression RegulationGlucose Tolerance TestHumansInsulin ResistanceIon ChannelsLamin Type BRNATmem120A protein, mouse

Identifiers

PMID35027552
PMCPMC8758788
OpenAlexW4220656328

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.