Evidence map›Paper›PMID 35044211›Full record

ArticleJournal of virology2022

Contribution of RNA-RNA Interactions Mediated by the Genome Packaging Signals for the Selective Genome Packaging of Influenza A Virus.

Sho Miyamoto, Yukiko Muramoto, Keiko Shindo, Yoko Fujita-Fujiharu, Takeshi Morikawa, Ryoma Tamura, Jamie L Gilmore, Masahiro Nakano, Takeshi Noda

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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  11. In vivo secondary structural analysis of Influenza A virus genomic RNA.Cellular and molecular life sciences : CMLS · 2023
    Article
  12. High-throughput droplet-based analysis of influenza A virus genetic reassortment by single-virus RNA sequencing.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sho MiyamotoLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.ORCID 0000-0001-6541-1722
Yukiko MuramotoLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Keiko ShindoLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Yoko Fujita-FujiharuLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Takeshi MorikawaLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Ryoma TamuraLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Jamie L GilmoreLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Masahiro NakanoLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Takeshi NodaLaboratory of Ultrastructural Virology, Institute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.ORCID 0000-0002-0658-4663
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The influenza A virus genome is composed of eight single-stranded negative-sense viral RNA segments (vRNAs). The eight vRNAs are selectively packaged into each progeny virion. This process likely involves specific interactions between the vRNAs via segment-specific packaging signals located in both the 3'- and 5'-terminal regions of the respective vRNAs. To assess the importance of vRNA-vRNA interactions via packaging signals for selective genome packaging, we generated mutant viruses possessing silent mutations in the packaging signal region of the hemagglutinin (HA) vRNA. A mutant virus possessing silent mutations in nucleotides (nt) 1664 to 1676 resulted in defects in HA vRNA incorporation and showed a reduction in viral growth. After serial passage, the mutant virus acquired additional mutations in the 5'-terminal packaging signal regions of both the HA and polymerase basic 2 (PB2) vRNAs. These mutations contributed to the recovery of viral growth and HA vRNA packaging efficiency. In addition, an RNA-RNA interaction between the 5' ends of HA and PB2 vRNAs was confirmed

Indexed as

Influenza A virusRNA, ViralViral Genome PackagingGenome, ViralHemagglutininsMutationVirionVirus AssemblyHemagglutininsRNA, Viralgenomegenome packaginginfluenza virus

Identifiers

PMID35044211
PMCPMC8941900
OpenAlexW4205488005

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.