Evidence map›Paper›PMID 35047423›Full record

ArticleFrontiers in cellular and infection microbiology2021

Integrated miRNA and mRNA Expression Profiles Reveal Differentially Expressed miR-222a as an Antiviral Factor Against Duck Hepatitis A Virus Type 1 Infection.

Nana Sui, Ruihua Zhang, Yue Jiang, Honglei Yu, Guige Xu, Jingyu Wang, Yanli Zhu, Zhijing Xie, Jiaqing Hu, Shijin Jiang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Differential responses to avian pathogenicFrontiers in cellular and infection microbiology · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Nana SuiCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Ruihua ZhangCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Yue JiangCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Honglei YuCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Guige XuCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Jingyu WangCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Yanli ZhuCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Zhijing XieCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Jiaqing HuCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Shijin JiangCollege of Veterinary Medicine, Shandong Agricultural University, Taian, China.
Shandong Agricultural University · CNBeike Biotechnology (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Duck hepatitis A virus 1 (DHAV-1) is a highly contagious etiological agent that causes acute hepatitis in young ducklings. MicroRNAs (miRNAs) play important regulatory roles in response to pathogens. However, the interplay between DHAV-1 infection and miRNAs remains ambiguous. We characterized and compared miRNA and mRNA expression profiles in duck embryo fibroblasts cells (DEFs) infected with DHAV-1. In total, 36 and 96 differentially expressed (DE) miRNAs, and 4110 and 2595 DE mRNAs, were identified at 12 and 24 h after infection. In particular, 126 and 275 miRNA-mRNA pairs with a negative correlation were chosen to construct an interaction network. Subsequently, we identified the functional annotation of DE mRNAs and target genes of DE miRNAs enriched in diverse Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, which may be important for virus resistance, cell proliferation, and metabolism. Moreover, upregulated miR-222a could negatively regulate DHAV-1 replication in DEFs and downregulate integrin subunit beta 3 (ITGB3) expression by targeting the 3' untranslated region (3'UTR), indicating that miR-222a may modulate DHAV-1 replication

Indexed as

Hepatitis Virus, DuckMicroRNAsAnimalsCells, CulturedDucksFibroblastsHepatitis, Viral, AnimalPicornaviridae InfectionsRNA, MessengerMicroRNAsRNA, Messenger3′UTRDHAV-1differential expressioninteraction networkITGB3miRNAmRNA

Identifiers

PMID35047423
PMCPMC8761743
OpenAlexW4206263791

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.