Evidence map›Paper›PMID 35052693›Full record

ArticleBiomedicines2021

A Conserved uORF Regulates APOBEC3G Translation and Is Targeted by HIV-1 Vif Protein to Repress the Antiviral Factor.

Camille Libre, Tanja Seissler, Santiago Guerrero, Julien Batisse, Cédric Verriez, Benjamin Stupfler, Orian Gilmer, Romina Cabrera-Rodriguez, Melanie M Weber, Agustin Valenzuela-Fernandez and 4 more

Abstract read
In one paragraph

Article in Biomedicines, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. TDP-43 Controls HIV-1 Viral Production and Virus Infectiveness.International journal of molecular sciences · 2023
    Article
  5. The Functional Meaning of 5'UTR in Protein-Coding Genes.International journal of molecular sciences · 2023
    Review
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Camille LibreArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.
Tanja SeisslerArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.
Santiago GuerreroArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.ORCID 0000-0003-3473-7214
Julien BatisseArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.ORCID 0000-0003-1285-1083
Cédric VerriezArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.ORCID 0000-0002-0881-7360
Benjamin StupflerArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.
Orian GilmerArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.ORCID 0000-0002-7968-2133
Romina Cabrera-RodriguezLaboratorio de Inmunología Celular y Viral, Unidad de Farmacología, Sección de Medicina, Facultad de Ciencias de la Salud, Universidad de La Laguna, 38320 Tenerife, Spain.ORCID 0000-0001-5671-6196
Melanie M WeberArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.
Agustin Valenzuela-FernandezLaboratorio de Inmunología Celular y Viral, Unidad de Farmacología, Sección de Medicina, Facultad de Ciencias de la Salud, Universidad de La Laguna, 38320 Tenerife, Spain.ORCID 0000-0002-2585-8703
Andrea CimarelliCIRI-International Center for Infectiology Research, INSERM U1111, Université Claude Bernard de Lyon 1, CNRS, UMR 5308, Ecole Normale de Lyon, Université de Lyon, F-69000 Lyon, France.
Lucie EtienneCIRI-International Center for Infectiology Research, INSERM U1111, Université Claude Bernard de Lyon 1, CNRS, UMR 5308, Ecole Normale de Lyon, Université de Lyon, F-69000 Lyon, France.
Roland MarquetArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.ORCID 0000-0002-4209-3976
Jean-Christophe PaillartArchitecture et Réactivité de l'ARN, UPR 9002, Université de Strasbourg: CNRS, 2 Allée Conrad Roentgen, F-67000 Strasbourg, France.ORCID 0000-0003-1647-8917

Funding

Agence Nationale de la Recherche ANR-11-LABX-0048Agence Nationale de Recherches sur le Sida et les Hépatites Virales ECTZ118944Agence Nationale de Recherches sur le Sida et les Hépatites Virales ECTZ134179Agence Nationale de Recherches sur le Sida et les Hépatites Virales ECTZ19143Fondation pour la Recherche Médicale ING20160435028Sidaction 20-1-AEQ-12613-1
6 · The paper itself

Abstract

The HIV-1 Vif protein is essential for viral fitness and pathogenicity. Vif decreases expression of cellular restriction factors APOBEC3G (A3G), A3F, A3D and A3H, which inhibit HIV-1 replication by inducing hypermutation during reverse transcription. Vif counteracts A3G at several levels (transcription, translation, and protein degradation) that altogether reduce the levels of A3G in cells and prevent its incorporation into viral particles. How Vif affects A3G translation remains unclear. Here, we uncovered the importance of a short conserved uORF (upstream ORF) located within two critical stem-loop structures of the 5' untranslated region (5'-UTR) of A3G mRNA for this process. A3G translation occurs through a combination of leaky scanning and translation re-initiation and the presence of an intact uORF decreases the extent of global A3G translation under normal conditions. Interestingly, the uORF is also absolutely required for Vif-mediated translation inhibition and redirection of A3G mRNA into stress granules. Overall, we discovered that A3G translation is regulated by a small uORF conserved in the human population and that Vif uses this specific feature to repress its translation.

Indexed as

APOBEC3GHIV-1mRNAtranslationuORFVif

Identifiers

PMID35052693
PMCPMC8773096

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.