Evidence map›Paper›PMID 35106589›Full record

ArticleNucleic acids research2022

Impact of guanidine-containing backbone linkages on stereopure antisense oligonucleotides in the CNS.

Pachamuthu Kandasamy, Yuanjing Liu, Vincent Aduda, Sandheep Akare, Rowshon Alam, Amy Andreucci, David Boulay, Keith Bowman, Michael Byrne, Megan Cannon and 27 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 68 citations in OpenAlex.

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  12. Genetic therapies for neurological diseases.Pharmacological reviews · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors at 1 institution in 1 country.

Pachamuthu KandasamyWave Life Sciences, Cambridge, MA 02138, USA.
Yuanjing LiuWave Life Sciences, Cambridge, MA 02138, USA.
Vincent AdudaWave Life Sciences, Cambridge, MA 02138, USA.
Sandheep AkareWave Life Sciences, Cambridge, MA 02138, USA.
Rowshon AlamWave Life Sciences, Cambridge, MA 02138, USA.
Amy AndreucciWave Life Sciences, Cambridge, MA 02138, USA.
David BoulayWave Life Sciences, Cambridge, MA 02138, USA.
Keith BowmanWave Life Sciences, Cambridge, MA 02138, USA.
Michael ByrneWave Life Sciences, Cambridge, MA 02138, USA.
Megan CannonWave Life Sciences, Cambridge, MA 02138, USA.
Onanong ChivatakarnWave Life Sciences, Cambridge, MA 02138, USA.
Juili Dilip ShelkeWave Life Sciences, Cambridge, MA 02138, USA.
Naoki IwamotoWave Life Sciences, Cambridge, MA 02138, USA.
Tomomi KawamotoWave Life Sciences, Cambridge, MA 02138, USA.
Jayakanthan KumarasamyWave Life Sciences, Cambridge, MA 02138, USA.
Sarah LamoreWave Life Sciences, Cambridge, MA 02138, USA.
Muriel LemaitreWave Life Sciences, Cambridge, MA 02138, USA.
Xuena LinWave Life Sciences, Cambridge, MA 02138, USA.
Kenneth LongoWave Life Sciences, Cambridge, MA 02138, USA.
Richard LoobyWave Life Sciences, Cambridge, MA 02138, USA.
Subramanian MarappanWave Life Sciences, Cambridge, MA 02138, USA.
Jake MettervilleWave Life Sciences, Cambridge, MA 02138, USA.
Susovan MohapatraWave Life Sciences, Cambridge, MA 02138, USA.
Bridget NewmanWave Life Sciences, Cambridge, MA 02138, USA.
Ik-Hyeon PaikWave Life Sciences, Cambridge, MA 02138, USA.
Saurabh PatilWave Life Sciences, Cambridge, MA 02138, USA.
Erin Purcell-EstabrookWave Life Sciences, Cambridge, MA 02138, USA.
Mamoru ShimizuWave Life Sciences, Cambridge, MA 02138, USA.
Pochi ShumWave Life Sciences, Cambridge, MA 02138, USA.
Stephany StandleyWave Life Sciences, Cambridge, MA 02138, USA.
Kris TabornWave Life Sciences, Cambridge, MA 02138, USA.
Snehlata TripathiWave Life Sciences, Cambridge, MA 02138, USA.
Hailin YangWave Life Sciences, Cambridge, MA 02138, USA.
Yuan YinWave Life Sciences, Cambridge, MA 02138, USA.
Xiansi ZhaoWave Life Sciences, Cambridge, MA 02138, USA.
Elena DaleWave Life Sciences, Cambridge, MA 02138, USA.
Chandra VargeeseWave Life Sciences, Cambridge, MA 02138, USA.ORCID 0000-0002-4690-7543
Wave Life Sciences (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Attaining sufficient tissue exposure at the site of action to achieve the desired pharmacodynamic effect on a target is an important determinant for any drug discovery program, and this can be particularly challenging for oligonucleotides in deep tissues of the CNS. Herein, we report the synthesis and impact of stereopure phosphoryl guanidine-containing backbone linkages (PN linkages) to oligonucleotides acting through an RNase H-mediated mechanism, using Malat1 and C9orf72 as benchmarks. We found that the incorporation of various types of PN linkages to a stereopure oligonucleotide backbone can increase potency of silencing in cultured neurons under free-uptake conditions 10-fold compared with similarly modified stereopure phosphorothioate (PS) and phosphodiester (PO)-based molecules. One of these backbone types, called PN-1, also yielded profound silencing benefits throughout the mouse brain and spinal cord at low doses, improving both the potency and durability of response, especially in difficult to reach brain tissues. Given these benefits in preclinical models, the incorporation of PN linkages into stereopure oligonucleotides with chimeric backbone modifications has the potential to render regions of the brain beyond the spinal cord more accessible to oligonucleotides and, consequently, may also expand the scope of neurological indications amenable to oligonucleotide therapeutics.

Indexed as

Oligonucleotides, AntisenseAnimalsCells, CulturedCentral Nervous SystemGuanidineMiceNeuronsPhosphorothioate OligonucleotidesRibonuclease HGuanidineOligonucleotides, AntisensePhosphorothioate OligonucleotidesRibonuclease H

Identifiers

PMID35106589
PMCPMC9177980
OpenAlexW4206666608

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.