Evidence map›Paper›PMID 35141985›Full record

ArticleThe journal of obstetrics and gynaecology research2022

Further delineation of familial polycystic ovary syndrome (PCOS) via whole-exome sequencing: PCOS-related rare FBN3 and FN1 gene variants are identified.

Cengiz Karakaya, Aylin Pelin Çil, Kaya Bilguvar, Tunahan Çakir, Mete Hakan Karalok, Recep Onur Karabacak, Ahmet Okay Caglayan

Open access · greenAbstract read
In one paragraph

Article in The journal of obstetrics and gynaecology research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Transcriptome screening and functional validation of FN1 in the regulation of granulosa cell proliferation in polycystic ovary syndrome.The Korean journal of physiology & pharmacology : official journal of the Korean Physiological Society and the Korean Society of Pharmacology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Cengiz KarakayaDepartment of Medical Biochemistry, Gazi University School of Medicine, Ankara, Turkey.
Aylin Pelin ÇilAmerican Hospital Women's Health and Assisted Reproductive Center Guzelbahce Sok, İstanbul, Turkey.
Kaya BilguvarDepartment of Genetics, Yale Center for Genome Analysis, Yale School of Medicine, New Haven, Connecticut, USA.
Tunahan ÇakirDepartment of Bioengineering, Gebze Technical University, Gebze, Turkey.
Mete Hakan KaralokDivision of Reproductive Endocrinology and Infertility, Department of Obstetrics, Gynecology, and Reproductive Sciences, Yale School of Medicine, New Haven, Connecticut, USA.
Recep Onur KarabacakDepartment of Obstetrics and Gynecology, Gazi University Faculty of Medicine, Ankara, Turkey.
Ahmet Okay CaglayanDepartments of Neurosurgery, Neurobiology and Genetics, Yale School of Medicine, New Haven, Connecticut, USA.ORCID https://orcid.org/0000-0002-2332-322X
Yale University · USAcıbadem University · TRAmerikan Hastanesi · TRDokuz Eylül University · TRGazi University · TRGebze Technical University · TR

Funding

Yale Center for Mendelian GenomicsUM1HG006504 · NHGRI · YALE UNIVERSITY · PI GERSTEIN, MARK BENDER, GUNEL, MURAT · 2016 to 2020
$14.8M
NHGRI NIH HHS UM1 HG006504NHGRI NIH HHS UM1HG006504NHGRI NIH HHS Yale Center for Mendelian Genomics/UM1HG006504
6 · The paper itself

Abstract

aimTo identify pathogenic rare coding Mendelian/high-effect size variant(s) by whole-exome sequencing in familial polycystic ovary syndrome (PCOS) patients to elucidate PCOS-related pathways.

methodsTwenty women and their affected available relatives diagnosed with PCOS according to Rotterdam criteria were recruited. Whole-exome sequencing on germ-line DNA from 31 PCOS probands and their affected relatives was performed. Whole-exome sequencing data were further evaluated by pathway and chemogenomics analyses. In-slico analysis of candidate variants were done by VarCards for functional predictions and VarSite for impact on three-dimensional (3D) structures in the candidate proteins.

resultsTwo heterozygous rare FBN3 missense variants in three patients, and one FN1 missense variant in one patient from three different PCOS families were identified.

conclusionWe identified three novel FBN3 and FN1 variants for the first time in the literature and linked with PCOS. Further functional studies may identify causality of these newly discovered PCOS-related variants, and their role yet remains to be investigated. Our findings may improve our understanding of the biological pathways affected and identify new drug targets.

Indexed as

FibrillinsFibronectinsPolycystic Ovary SyndromeExome SequencingFemaleHumansFBN3 protein, humanFibrillinsFibronectinsFN1 protein, humanextracellular matrixgeneticsPCOSwhole-exome sequencing

Identifiers

PMID35141985
PMCPMC9050819
OpenAlexW4210967735

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.