Evidence map›Paper›PMID 35195669›Full record

ArticleThe Journal of cell biology2022

Ribbon boosts ribosomal protein gene expression to coordinate organ form and function.

Rajprasad Loganathan, Daniel C Levings, Ji Hoon Kim, Michael B Wells, Hannah Chiu, Yifan Wu, Matthew Slattery, Deborah J Andrew

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. TheGenes · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Rajprasad LoganathanDepartment of Cell Biology, Johns Hopkins University, Baltimore, MD.ORCID 0000-0001-5618-4222
Daniel C LevingsDepartment of Biomedical Sciences, University of Minnesota Medical School, Duluth, MN.ORCID 0000-0002-8678-0794
Ji Hoon KimDepartment of Cell Biology, Johns Hopkins University, Baltimore, MD.
Michael B WellsDepartment of Cell Biology, Johns Hopkins University, Baltimore, MD.
Hannah ChiuDepartment of Cell Biology, Johns Hopkins University, Baltimore, MD.
Yifan WuDepartment of Cell Biology, Johns Hopkins University, Baltimore, MD.
Matthew SlatteryDepartment of Biomedical Sciences, University of Minnesota Medical School, Duluth, MN.
Deborah J AndrewDepartment of Cell Biology, Johns Hopkins University, Baltimore, MD.ORCID 0000-0003-1051-6935
Johns Hopkins University · USUniversity of Minnesota, Duluth · US

Funding

FORMATION OF THE DROSOPHILA SALIVARY GLANDR01DE013899 · NIDCR · JOHNS HOPKINS UNIVERSITY · PI Deborah J Andrew · 2001 to 2026
$11.2M
Regulatory Precision in Stress Responsive Transcriptional NetworksR35GM119553 · NIGMS · UNIVERSITY OF MINNESOTA · PI SLATTERY, MATTHEW · 2016 to 2020
$1.9M
Coordination of Growth and Form in the Embryonic Salivary Gland and TracheaR56DE029450 · NIDCR · JOHNS HOPKINS UNIVERSITY · PI ANDREW, DEBORAH J · 2021 to 2021
$549k
NIDCR NIH HHS R01 DE013899NIDCR NIH HHS R56 DE029450NIGMS NIH HHS R35 GM119553NIH HHS R01DE013899
6 · The paper itself

Abstract

Cell growth is well defined for late (postembryonic) stages of development, but evidence for early (embryonic) cell growth during postmitotic morphogenesis is limited. Here, we report early cell growth as a key characteristic of tubulogenesis in the Drosophila embryonic salivary gland (SG) and trachea. A BTB/POZ domain nuclear factor, Ribbon (Rib), mediates this early cell growth. Rib binds the transcription start site of nearly every SG-expressed ribosomal protein gene (RPG) and is required for full expression of all RPGs tested. Rib binding to RPG promoters in vitro is weak and not sequence specific, suggesting that specificity is achieved through cofactor interactions. Accordingly, we demonstrate Rib's ability to physically interact with each of the three known regulators of RPG transcription. Surprisingly, Rib-dependent early cell growth in another tubular organ, the embryonic trachea, is not mediated by direct RPG transcription. These findings support a model of early cell growth customized by transcriptional regulatory networks to coordinate organ form and function.

Indexed as

Promoter Regions, GeneticAnimalsCytoskeletal ProteinsDrosophila melanogasterDrosophila ProteinsRibosomal ProteinsSalivary GlandsTranscription Initiation SiteCytoskeletal ProteinsDrosophila ProteinsRibosomal Proteinsrib protein, Drosophila

Identifiers

PMID35195669
PMCPMC9237840
OpenAlexW4212781490

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.