Evidence map›Paper›PMID 35196314›Full record

ArticlePloS one2022

Similarities between bacterial GAD and human GAD65: Implications in gut mediated autoimmune type 1 diabetes.

Suhana Bedi, Tiffany M Richardson, Baofeng Jia, Hadeel Saab, Fiona S L Brinkman, Monica Westley

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. The role of GABA in type 1 diabetes.Frontiers in endocrinology · 2024
    Review
  7. Probiotic for Pancreatic β-Cell Function in Type 2 Diabetes: A Randomized, Double-Blinded, Placebo-Controlled Clinical Trial.Diabetes therapy : research, treatment and education of diabetes and related disorders · 2023
    Article
  8. Article
  9. Type 1 diabetes mellitus prevention.Pediatric endocrinology, diabetes, and metabolism · 2023
    Article
  10. Pathophysiology of Type 1 Diabetes and Gut Microbiota Role.International journal of molecular sciences · 2022
    Review
  11. Review
  12. Review
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Suhana BediDepartment of Natural Sciences and Mathematics, The University of Texas at Dallas, Richardson, TX, United States of America.
Tiffany M RichardsonDepartment of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN, United States of America.ORCID 0000-0002-0272-6804
Baofeng JiaDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, CA, United States of America.
Hadeel SaabIntern, The(sugar)science, Los Angeles, CA, United States of America.
Fiona S L BrinkmanDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, CA, United States of America.
Monica WestleyFounder, The(sugar)science, Los Angeles, CA, United States of America.ORCID 0000-0002-2917-208X
Simon Fraser University · CAThe University of Texas at Dallas · USVanderbilt University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A variety of islet autoantibodies (AAbs) can predict and possibly dictate eventual type 1 diabetes (T1D) diagnosis. Upwards of 75% of those with T1D are positive for AAbs against glutamic acid decarboxylase (GAD65 or GAD), a producer of gamma-aminobutyric acid (GABA) in human pancreatic beta cells. Interestingly, bacterial populations within the human gut also express GAD and produce GABA. Evidence suggests that dysbiosis of the microbiome may correlate with T1D pathogenesis and physiology. Therefore, autoimmune linkages between the gut microbiome and islets susceptible to autoimmune attack need to be further elucidated. Utilizing in silico analyses, we show that 25 GAD sequences from human gut bacterial sources show sequence and motif similarities to human beta cell GAD65. Our motif analyses determined that most gut GAD sequences contain the pyroxical dependent decarboxylase (PDD) domain of human GAD65, which is important for its enzymatic activity. Additionally, we showed overlap with known human GAD65 T cell receptor epitopes, which may implicate the immune destruction of beta cells. Thus, we propose a physiological hypothesis in which changes in the gut microbiome in those with T1D result in a release of bacterial GAD, thus causing miseducation of the host immune system. Due to the notable similarities we found between human and bacterial GAD, these deputized immune cells may then target human beta cells leading to the development of T1D.

Indexed as

AnimalsAntigen-Presenting CellsAutoantibodiesBacteriaComputer SimulationDiabetes Mellitus, Type 1Epitopes, T-Lymphocytegamma-Aminobutyric AcidGastrointestinal MicrobiomeGenes, BacterialGlutamate DecarboxylaseHumansIslets of LangerhansMicePan troglodytesPhylogenyanti-GAD65 autoantibodyAutoantibodiesEpitopes, T-Lymphocytegamma-Aminobutyric AcidGlutamate Decarboxylaseglutamate decarboxylase 2

Identifiers

PMID35196314
PMCPMC8865633
OpenAlexW4225921000

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.