Evidence map›Paper›PMID 35211836›Full record

ArticleFunctional & integrative genomics2022

Identifying key genes involved in yellow leaf variation in 'Menghai Huangye' based on biochemical and transcriptomic analysis.

Yufei Liu, Dandan Pang, Huibing Jiang, Chunlin Chen, Yunnan Sun, Yiping Tian, Yan Xu, Weixi Song, Linbo Chen

Abstract read
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In one paragraph

Article in Functional & integrative genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Horticulture research · 2023
    Article
  4. Article
  5. Topics and trends in fresh tea (Frontiers in plant science · 2023
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yufei LiuTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.ORCID http://orcid.org/0000-0001-8839-8997
Dandan PangTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.
Huibing JiangTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.
Chunlin ChenTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.
Yunnan SunTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.
Yiping TianTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.
Yan XuTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.
Weixi SongTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China.
Linbo ChenTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201, China. chenlinbo2002@sina.com.
Yunnan Academy of Agricultural Sciences · CNTea Research Institute · CN

Funding

China Earmarked Fund for Modern Agro-industry Technology Research System CARS-19Key Technology Research and Development Program of Shandong 2019YFD1001601Major Special Science and Technology Project of Yunnan Province 202002AE320001Major Special Science and Technology Project of Yunnan Province 202102AE090038
6 · The paper itself

Abstract

Albino tea plants generally have higher theanine, which causes their tea leaves to taste fresher, and they are an important mutant for the breeding of tea plant varieties. Earlier, we reported an albino germplasm, 'Menghai Huangye' (MHHY), from Yunnan Province and found that it has a lower chlorophyll content during the yellowing stage, but the mechanism underlying low chlorophyll and the yellowing phenotype is still unclear. In this study, the pigment contents of MHHY_May (yellowing, low chlorophyll), MHHY_July (regreening, normal chlorophyll), and YK10_May (green leaves, normal chlorophyll) were determined, and the results showed that the lower chlorophyll content might be an important reason for the formation of the yellowing phenotype of MHHY. Through transcriptome sequencing, we obtained 654 candidates for differentially expressed genes (DEGs), among which 4 genes were related to chlorophyll synthesis, 10 were photosynthesis-related, 34 were HSP family genes, and 19 were transcription factor genes. In addition, we analysed the transcription levels of the key candidate genes in MHHY_May and MHHY_July and found that they are consistent with the expression trends in MHHY_May and YK10_May, which further indicates that the candidate differential genes we identified are likely to be key candidate factors involved in the low chlorophyll content and yellowing of MHHY. In summary, our findings will assist in revealing the low chlorophyll content of MHHY and the formation mechanism of yellowing tea plants and will be applied to the selection and breeding of albino tea cultivars in the future.

Indexed as

Camellia sinensisTranscriptomeChinaGene Expression Regulation, PlantPlant BreedingPlant LeavesPlant ProteinsPlant ProteinsAlbinoCamellia sinensisChlorophyllTranscription factorTranscriptome

Identifiers

PMID35211836
OpenAlexW4214649573

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.