Evidence map›Paper›PMID 35223208›Full record

ArticlePeerJ2022

SMRT sequencing of full-length transcriptome and gene expression analysis in two chemical types of

Hongyi Zhang, Wenjing Deng, Changhua Lu, Mengling He, Hanjing Yan

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Whole-Genome Resequencing Reveals the Diversity of Patchouli Germplasm.International journal of molecular sciences · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hongyi ZhangCollege of Traditional Chinese Medicine, Guangdong Pharmaceutical University, Guangzhou, Guangdong, China.
Wenjing DengCollege of Traditional Chinese Medicine, Guangdong Pharmaceutical University, Guangzhou, Guangdong, China.
Changhua LuCollege of Traditional Chinese Medicine, Guangdong Pharmaceutical University, Guangzhou, Guangdong, China.ORCID 0000-0002-8260-9738
Mengling HeCollege of Traditional Chinese Medicine, Guangdong Pharmaceutical University, Guangzhou, Guangdong, China.
Hanjing YanCollege of Traditional Chinese Medicine, Guangdong Pharmaceutical University, Guangzhou, Guangdong, China.
Guangdong Pharmaceutical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background

methodsTo better understand the genetic differences between the two chemical types that contribute to their differences in morphology and biosynthetic capabilities, we constructed

resultsIn this study, using single-molecule real-time (SMRT) long-read sequencing, we obtained 22.07 GB of clean data and 134,647 nonredundant transcripts from two chemical types. Additionally, we identified 126,576 open reading frames (ORFs), 100,638 coding sequences (CDSs), 4,106 long noncoding RNAs (lncRNAs) and 6,829 transcription factors (TFs) from two chemical types of

Indexed as

PogostemonSesquiterpenesGene Expression ProfilingTerpenesTranscriptomeSesquiterpenesTerpenesPogostemon cablin (Blanco) Benth.SMRTTerpenoid biosynthesisTranscriptomeTwo chemical types

Identifiers

PMID35223208
PMCPMC8877398
OpenAlexW4212981232

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.