Evidence map›Paper›PMID 35233102›Full record

ArticleCommunications biology2022

Structural and functional characterization of an achromatopsia-associated mutation in a phototransduction channel.

Xiangdong Zheng, Huan Li, Zhengshan Hu, Deyuan Su, Jian Yang

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

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  9. Case Report: NovelFrontiers in genetics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xiangdong Zheng *Department of Biological Sciences, Columbia University, New York, NY, 10027, USA.
Huan Li *Department of Biological Sciences, Columbia University, New York, NY, 10027, USA.
Zhengshan Hu *Department of Biological Sciences, Columbia University, New York, NY, 10027, USA.ORCID http://orcid.org/0000-0003-3833-0462
Deyuan SuDepartment of Biological Sciences, Columbia University, New York, NY, 10027, USA.
Jian YangDepartment of Biological Sciences, Columbia University, New York, NY, 10027, USA. jy160@columbia.edu.ORCID http://orcid.org/0000-0003-0290-7688
Columbia University · US

Funding

TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2012 to 2021
$14.7M
TRPML1 channel physiology and pathophysiologyR01GM085234 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI YANG, JIAN · 2009 to 2022
$4.2M
Molecular physiology of cyclic nucleotide-gated channelsR01EY027800 · NEI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI YANG, JIAN · 2017 to 2019
$1.5M
Acquisition of Detector for JEOL 3200 FSC Electron MicroscopeS10OD019994 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI CARRAGHER, BRIDGET OLIVIA · 2015 to 2015
$600k
NEI NIH HHS R01 EY027800NIGMS NIH HHS P41 GM103310NIGMS NIH HHS R01 GM085234NIH HHS S10 OD019994
6 · The paper itself

Abstract

Numerous missense mutations in cyclic nucleotide-gated (CNG) channels cause achromatopsia and retinitis pigmentosa, but the underlying pathogenic mechanisms are often unclear. We investigated the structural basis and molecular/cellular effects of R410W, an achromatopsia-associated, presumed loss-of-function mutation in human CNGA3. Cryo-EM structures of the Caenorhabditis elegans TAX-4 CNG channel carrying the analogous mutation, R421W, show that most apo channels are open. R421, located in the gating ring, interacts with the S4 segment in the closed state. R421W disrupts this interaction, destabilizes the closed state, and stabilizes the open state. CNGA3_R410W/CNGB3 and TAX4_R421W channels are spontaneously active without cGMP and induce cell death, suggesting cone degeneration triggered by spontaneous CNG channel activity as a possible cause of achromatopsia. Our study sheds new light on CNG channel allosteric gating, provides an impetus for a reevaluation of reported loss-of-function CNG channel missense disease mutations, and has implications for mutation-specific treatment of retinopathy.

Indexed as

Color Vision DefectsCyclic Nucleotide-Gated Cation ChannelsHumansLight Signal TransductionMutation, MissenseRetinal Cone Photoreceptor CellsCNGA3 protein, humanCyclic Nucleotide-Gated Cation Channels

Identifiers

PMID35233102
PMCPMC8888761
OpenAlexW4214587214

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.