Evidence map›Paper›PMID 35243521›Full record

ArticleDiabetologia2022

Spatial and transcriptional heterogeneity of pancreatic beta cell neogenesis revealed by a time-resolved reporter system.

Shugo Sasaki, Michelle Y Y Lee, Yuka Wakabayashi, Luka Suzuki, Helena Winata, Miwa Himuro, Taka-Aki Matsuoka, Iichiro Shimomura, Hirotaka Watada, Francis C Lynn and 1 more

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Diabetologia, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Differential CpG methylation atbioRxiv : the preprint server for biology · 2023
    Article
  7. Review
  8. Review
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Shugo SasakiDepartment of Metabolic Medicine, Osaka University Graduate School of Medicine, Osaka, Japan. shugosasaki@endmet.med.osaka-u.ac.jp.ORCID 0000-0002-3696-7809
Michelle Y Y LeeDiabetes Research Group, BC Children's Hospital Research Institute, Vancouver, BC, Canada.ORCID 0000-0002-5574-8011
Yuka WakabayashiDepartment of Metabolism and Endocrinology, Juntendo University Graduate School of Medicine, Tokyo, Japan.
Luka SuzukiDepartment of Metabolism and Endocrinology, Juntendo University Graduate School of Medicine, Tokyo, Japan.
Helena WinataDiabetes Research Group, BC Children's Hospital Research Institute, Vancouver, BC, Canada.ORCID 0000-0002-1001-5316
Miwa HimuroDepartment of Metabolism and Endocrinology, Juntendo University Graduate School of Medicine, Tokyo, Japan.ORCID 0000-0003-1621-2844
Taka-Aki MatsuokaDepartment of Metabolic Medicine, Osaka University Graduate School of Medicine, Osaka, Japan.ORCID 0000-0002-9952-9873
Iichiro ShimomuraDepartment of Metabolic Medicine, Osaka University Graduate School of Medicine, Osaka, Japan.ORCID 0000-0002-0851-9603
Hirotaka WatadaDepartment of Metabolism and Endocrinology, Juntendo University Graduate School of Medicine, Tokyo, Japan.ORCID 0000-0001-5961-1816
Francis C LynnDiabetes Research Group, BC Children's Hospital Research Institute, Vancouver, BC, Canada. francis.lynn@ubc.ca.ORCID 0000-0001-9318-1063
Takeshi MiyatsukaDepartment of Metabolism and Endocrinology, Juntendo University Graduate School of Medicine, Tokyo, Japan. miyatsuka-takeshi@umin.net.ORCID 0000-0003-2618-3450
Juntendo University · JPBC Children's Hospital · CAThe University of Osaka · JPUniversity of British Columbia · CA

Funding

CIHR FRN 156377
6 · The paper itself

Abstract

aims/hypothesisWhile pancreatic beta cells have been shown to originate from endocrine progenitors in ductal regions, it remains unclear precisely where beta cells emerge from and which transcripts define newborn beta cells. We therefore investigated characteristics of newborn beta cells extracted by a time-resolved reporter system.

methodsWe established a mouse model, 'Ins1-GFP; Timer', which provides spatial information during beta cell neogenesis with high temporal resolution. Single-cell RNA-sequencing (scRNA-seq) was performed on mouse beta cells sorted by fluorescent reporter to uncover transcriptomic profiles of newborn beta cells. scRNA-seq of human embryonic stem cell (hESC)-derived beta-like cells was also performed to compare newborn beta cell features between mouse and human.

resultsFluorescence imaging of Ins1-GFP; Timer mouse pancreas successfully dissected newly generated beta cells as green fluorescence-dominant cells. This reporter system revealed that, as expected, some newborn beta cells arise close to the ducts (β CONCLUSIONS/

interpretationThe combination of time-resolved histological imaging with single-cell transcriptional mapping demonstrated novel features of spatial and transcriptional heterogeneity in beta cell neogenesis, which will lead to a better understanding of beta cell differentiation for future cell therapy. DATA AVAILABILITY: Raw and processed single-cell RNA-sequencing data for this study has been deposited in the Gene Expression Omnibus under accession number GSE155742.

Indexed as

FibrosarcomaInsulin-Secreting CellsTranscriptomeAnimalsCell DifferentiationGlucagonHumansMicePancreatic DuctsRNAGlucagonRNABlood vesselDifferentiationGCGMafAMafBNeogenesisPancreatic beta cellPancreatic ductSingle-cell RNA-sequencing

Identifiers

PMID35243521
OpenAlexW4214833671

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.