Evidence map›Paper›PMID 35255094›Full record

ArticlePLoS pathogens2022

Single-cell transcriptomics reveals expression profiles of Trypanosoma brucei sexual stages.

Virginia M Howick, Lori Peacock, Chris Kay, Clare Collett, Wendy Gibson, Mara K N Lawniczak

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Single-cell atlas ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Parasite OMICS, the grand challenges ahead.Frontiers in parasitology · 2022
    Article
  14. Article
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Virginia M HowickInstitute of Biodiversity, Animal Health, and Comparative Medicine, University of Glasgow, Glasgow, United Kingdom.
Lori PeacockSchool of Biological Sciences, University of Bristol, Bristol, United Kingdom.
Chris KaySchool of Biological Sciences, University of Bristol, Bristol, United Kingdom.
Clare CollettSchool of Biological Sciences, University of Bristol, Bristol, United Kingdom.
Wendy GibsonSchool of Biological Sciences, University of Bristol, Bristol, United Kingdom.
Mara K N LawniczakParasites and Microbes Programme, Wellcome Sanger Institute, Hinxton, United Kingdom.
University of Bristol · GBWellcome Sanger Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/R010188/1Biotechnology and Biological Sciences Research Council BB/R016437/1Wellcome TrustWellcome Trust 206194/Z/17/ZWellcome Trust 220185/Z/20/Z
6 · The paper itself

Abstract

Early diverging lineages such as trypanosomes can provide clues to the evolution of sexual reproduction in eukaryotes. In Trypanosoma brucei, the pathogen that causes Human African Trypanosomiasis, sexual reproduction occurs in the salivary glands of the insect host, but analysis of the molecular signatures that define these sexual forms is complicated because they mingle with more numerous, mitotically-dividing developmental stages. We used single-cell RNA-sequencing (scRNAseq) to profile 388 individual trypanosomes from midgut, proventriculus, and salivary glands of infected tsetse flies allowing us to identify tissue-specific cell types. Further investigation of salivary gland parasite transcriptomes revealed fine-scale changes in gene expression over a developmental progression from putative sexual forms through metacyclics expressing variant surface glycoprotein genes. The cluster of cells potentially containing sexual forms was characterized by high level transcription of the gamete fusion protein HAP2, together with an array of surface proteins and several genes of unknown function. We linked these expression patterns to distinct morphological forms using immunofluorescence assays and reporter gene expression to demonstrate that the kinetoplastid-conserved gene Tb927.10.12080 is exclusively expressed at high levels by meiotic intermediates and gametes. Further experiments are required to establish whether this protein, currently of unknown function, plays a role in gamete formation and/or fusion.

Indexed as

TrypanosomaTrypanosoma brucei bruceiTrypanosomiasis, AfricanTsetse FliesAnimalsTranscriptome

Identifiers

PMID35255094
PMCPMC8939820
OpenAlexW4221019092

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.