Evidence map›Paper›PMID 35299787›Full record

ArticleVirus evolution2021

Long-read sequencing reveals the evolutionary drivers of intra-host diversity across natural RNA mycovirus infections.

Deborah M Leigh, Karla Peranić, Simone Prospero, Carolina Cornejo, Mirna Ćurković-Perica, Quirin Kupper, Lucija Nuskern, Daniel Rigling, Marin Ježić

Abstract read
In one paragraph

Article in Virus evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Predicting pathogen evolution and immune evasion in the age of artificial intelligence.Computational and structural biotechnology journal · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Deborah M LeighPhytopathology, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf CH-8903, Switzerland.ORCID https://orcid.org/0000-0003-3902-2568
Karla PeranićFaculty of Science, University of Zagreb, Zagreb, Grad Zagreb 10000, Croatia.
Simone ProsperoPhytopathology, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf CH-8903, Switzerland.
Carolina CornejoPhytopathology, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf CH-8903, Switzerland.
Mirna Ćurković-PericaFaculty of Science, University of Zagreb, Zagreb, Grad Zagreb 10000, Croatia.
Quirin Kupper
Lucija NuskernFaculty of Science, University of Zagreb, Zagreb, Grad Zagreb 10000, Croatia.
Daniel RiglingPhytopathology, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf CH-8903, Switzerland.
Marin JežićFaculty of Science, University of Zagreb, Zagreb, Grad Zagreb 10000, Croatia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intra-host dynamics are a core component of virus evolution but most intra-host data come from a narrow range of hosts or experimental infections. Gaining broader information on the intra-host diversity and dynamics of naturally occurring virus infections is essential to our understanding of evolution across the virosphere. Here we used PacBio long-read HiFi sequencing to characterize the intra-host populations of natural infections of the RNA mycovirus

Indexed as

chestnut blightepistasisintra-host diversitynatural infectionPacBio HiFiRNA virusvirus evolution

Identifiers

PMID35299787
PMCPMC8923234

What Socratic holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.