Evidence map›Paper›PMID 35306591›Full record

ArticleArchives of virology2022

A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome.

Enikő Fehér, Krisztina Bali, Eszter Kaszab, Katalin Ihász, Szilvia Jakab, Borbála Nagy, Krisztina Ursu, Szilvia L Farkas, Krisztián Bányai

Open access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Gyrovirus: current status and challenge.Frontiers in microbiology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Enikő FehérVeterinary Medical Research Institute, Hungária krt 21, Budapest, 1143, Hungary. feher.eniko@vmri.hu.ORCID http://orcid.org/0000-0001-7778-9116
Krisztina BaliVeterinary Medical Research Institute, Hungária krt 21, Budapest, 1143, Hungary.
Eszter KaszabVeterinary Medical Research Institute, Hungária krt 21, Budapest, 1143, Hungary.ORCID http://orcid.org/0000-0002-5750-1872
Katalin IhászVeterinary Medical Research Institute, Hungária krt 21, Budapest, 1143, Hungary.
Szilvia JakabVeterinary Medical Research Institute, Hungária krt 21, Budapest, 1143, Hungary.
Borbála NagyVeterinary Medical Research Institute, Hungária krt 21, Budapest, 1143, Hungary.
Krisztina UrsuVeterinary Diagnostic Directorate, National Food Chain Safety Office, Tábornok utca 2, Budapest, 1143, Hungary.
Szilvia L FarkasUniversity of Veterinary Medicine, István utca 2, Budapest, 1078, Hungary.
Krisztián BányaiVeterinary Medical Research Institute, Hungária krt 21, Budapest, 1143, Hungary.ORCID http://orcid.org/0000-0002-6270-1772
HUN-REN Veterinary Medical Research Institute · HUNational Food Chain Safety Office · HUUniversity of Veterinary Medicine · HU

Funding

Momentum Program of the Hungarian Academy of Sciences LP2011-10National Research, Development and nnovation Office (NKFI-OTKA) K124655
6 · The paper itself

Abstract

A novel gyrovirus was detected in an intestinal specimen of a common pheasant that died due to poult enteritis and mortality syndrome. The genome of the pheasant-associated gyrovirus (PAGyV) is 2353 nucleotides (nt) long and contains putative genes for the VP1, VP2, and VP3 proteins in an arrangement that is typical for gyroviruses. Gyrovirus-specific motifs were identified in both the coding region and the intergenic region of the PAGyV genome. The VP1 of PAGyV shares up to 67.6% pairwise nt sequence identity with reference sequences and forms a distinct branch in the phylogenetic tree. Thus, according to the recently described species demarcation criteria, PAGyV belongs to a novel species in the genus Gyrovirus, family Anelloviridae, for which we propose the name "Gyrovirus phaco 1".

Indexed as

EnteritisGyrovirusAnimalsGenome, ViralPhylogenyQuailSequence Analysis, DNATurkeys

Identifiers

PMID35306591
PMCPMC9038835
OpenAlexW4220790741

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.