Evidence map›Paper›PMID 35311536›Full record

ArticlemBio2022

Coevolutionary Analysis Implicates Toll-Like Receptor 9 in Papillomavirus Restriction.

Kelly King, Brendan B Larsen, Sophie Gryseels, Cécile Richet, Simona Kraberger, Robert Jackson, Michael Worobey, Joseph S Harrison, Arvind Varsani, Koenraad Van Doorslaer

Open access · goldAbstract read
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Characterization of Three Novel Papillomavirus Genomes in Vampire Bats (Animals : an open access journal from MDPI · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Kelly KingSchool of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, Arizona, USA.ORCID 0000-0001-7722-6380
Brendan B LarsenDepartment of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, USA.ORCID 0000-0003-3136-2218
Sophie GryseelsDepartment of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, USA.ORCID 0000-0002-4851-9384
Cécile RichetThe Biodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State Universitygrid.215654.1, Tempe, Arizona, USA.
Simona KrabergerThe Biodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State Universitygrid.215654.1, Tempe, Arizona, USA.ORCID 0000-0002-7037-9242
Robert JacksonSchool of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, Arizona, USA.ORCID 0000-0001-9898-5546
Michael WorobeyDepartment of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, USA.ORCID 0000-0002-3578-1367
Joseph S HarrisonDepartment of Chemistry, University of the Pacific, Stockton, California, USA.ORCID 0000-0002-2118-6524
Arvind VarsaniThe Biodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State Universitygrid.215654.1, Tempe, Arizona, USA.ORCID 0000-0003-4111-2415
Koenraad Van DoorslaerSchool of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, Arizona, USA.ORCID 0000-0002-2985-0733
University of Arizona · USArizona State University · USUniversity of Cape Town · ZAUniversity of the Pacific · US

Funding

TRIF funding
6 · The paper itself

Abstract

Upon infection, DNA viruses can be sensed by pattern recognition receptors (PRRs), leading to the activation of type I and III interferons to block infection. Therefore, viruses must inhibit these signaling pathways, avoid being detected, or both. Papillomavirus virions are trafficked from early endosomes to the Golgi apparatus and wait for the onset of mitosis to complete nuclear entry. This unique subcellular trafficking strategy avoids detection by cytoplasmic PRRs, a property that may contribute to the establishment of infection. However, as the capsid uncoats within acidic endosomal compartments, the viral DNA may be exposed to detection by Toll-like receptor 9 (TLR9). In this study, we characterized two new papillomaviruses from bats and used molecular archeology to demonstrate that their genomes altered their nucleotide compositions to avoid detection by TLR9, providing evidence that TLR9 acts as a PRR during papillomavirus infection. Furthermore, we showed that TLR9, like other components of the innate immune system, is under evolutionary selection in bats, providing the first direct evidence for coevolution between papillomaviruses and their hosts. Finally, we demonstrated that the cancer-associated human papillomaviruses show a reduction in CpG dinucleotides within a TLR9 recognition complex.

Indexed as

Papillomavirus InfectionsVirus DiseasesVirusesHumansNucleotidesPapillomaviridaeReceptors, Pattern RecognitionToll-Like Receptor 9NucleotidesReceptors, Pattern RecognitionTLR9 protein, humanToll-Like Receptor 9evolutionary biologyinnate immunityMexican free-tailed batPapillomaviridaepapillomavirusspeciationTLR9

Identifiers

PMID35311536
PMCPMC9040848
OpenAlexW4220780605

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.