Evidence map›Paper›PMID 35317702›Full record

ArticleEmerging microbes & infections2022

Adaptive evolution of West Nile virus facilitated increased transmissibility and prevalence in New York State.

Sean M Bialosuknia, Alan P Dupuis Ii, Steven D Zink, Cheri A Koetzner, Joseph G Maffei, Jennifer C Owen, Hannah Landwerlen, Laura D Kramer, Alexander T Ciota

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
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  4. Understanding patterns of variant emergence and spread in an ongoing epidemic.medRxiv : the preprint server for health sciences · 2026
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  14. Surveillance and Genetic Analysis of Jamestown Canyon Virus in New York State: 2001-2022.The American journal of tropical medicine and hygiene · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sean M BialosukniaNew York State Department of Health, The Arbovirus Laboratory, Wadsworth Center, Slingerlands, NY, USA.ORCID 0000-0003-1687-0038
Alan P Dupuis IiNew York State Department of Health, The Arbovirus Laboratory, Wadsworth Center, Slingerlands, NY, USA.ORCID 0000-0003-0703-9250
Steven D ZinkNew York State Department of Health, The Arbovirus Laboratory, Wadsworth Center, Slingerlands, NY, USA.ORCID 0000-0002-3271-0192
Cheri A KoetznerNew York State Department of Health, The Arbovirus Laboratory, Wadsworth Center, Slingerlands, NY, USA.
Joseph G MaffeiNew York State Department of Health, The Arbovirus Laboratory, Wadsworth Center, Slingerlands, NY, USA.
Jennifer C OwenDepartment of Fisheries and Wildlife, Michigan State University, East Lansing, MI, USA.
Hannah LandwerlenDepartment of Fisheries and Wildlife, Michigan State University, East Lansing, MI, USA.
Laura D KramerNew York State Department of Health, The Arbovirus Laboratory, Wadsworth Center, Slingerlands, NY, USA.
Alexander T CiotaNew York State Department of Health, The Arbovirus Laboratory, Wadsworth Center, Slingerlands, NY, USA.ORCID 0000-0001-6589-4728
New York State Department of Health · USAlbany State University · USMichigan State University · US

Funding

Modeling the influence of temperature on the evolution of vector-virus interactionsR01AI168097 · NIAID · WADSWORTH CENTER · PI Alexander Timothy Ciota · 2022 to 2026
$2.4M
Evaluation of a Behavioral Intervention to Promote Food Allergy Self-Management Among Early AdolescentsR01AI168090 · NIAID · CHILDREN'S RESEARCH INSTITUTE · PI Linda Jones Herbert · 2023 to 2026
$2.1M
Evaluating the consequences of genotype displacement and geographic bias of West Nile virus in New York StateR21AI146856 · NIAID · WADSWORTH CENTER · PI CIOTA, ALEXANDER TIMOTHY · 2020 to 2021
$378k
NCEZID CDC HHS U01 CK000509NIAID NIH HHS R01 AI168090NIAID NIH HHS R01 AI168097NIAID NIH HHS R21 AI146856
6 · The paper itself

Abstract

West Nile virus (WNV; Flavivirus, Flaviviridae) was introduced to New York State (NYS) in 1999 and rapidly expanded its range through the continental United States (US). Apart from the displacement of the introductory NY99 genotype with the WN02 genotype, there has been little evidence of adaptive evolution of WNV in the US. WNV NY10, characterized by shared amino acid substitutions R1331K and I2513M, emerged in 2010 coincident with increased WNV cases in humans and prevalence in mosquitoes. Previous studies demonstrated an increase in frequency of NY10 strains in NYS and evidence of positive selection. Here, we present updated surveillance and sequencing data for WNV in NYS and investigate if NY10 genotype strains are associated with phenotypic change consistent with an adaptive advantage. Results confirm a significant increase in prevalence in mosquitoes though 2018, and updated sequencing demonstrates a continued dominance of NY10. We evaluated NY10 strains in

Indexed as

West Nile FeverWest Nile virusAnimalsHumansMosquito VectorsNew YorkPrevalenceadaptive evolutionarbovirusFlavivirusvirus evolutionWest Nile virus

Identifiers

PMID35317702
PMCPMC8982463
OpenAlexW4220699116

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.