Evidence map›Paper›PMID 35368702›Full record

ArticleFrontiers in genetics2022

SNP-Based Genome-Wide Association Mapping of Pollen Viability Under Heat Stress in Tropical

Zubair Ahmed, Maria Khalid, Abdul Ghafoor, Muhammad Kausar Nawaz Shah, Ghazala Kaukab Raja, Rashid Mehmood Rana, Tahir Mahmood, Addie M Thompson

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Zubair AhmedDepartment of Plant Breeding and Genetics, Pir Mehar Ali Shah Arid Agriculture University, Rawalpindi, Pakistan.
Maria KhalidInstitute of Biochemistry and Biotechnology, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi, Pakistan.
Abdul GhafoorPakistan Agricultural Research Council, Islamabad, Pakistan.
Muhammad Kausar Nawaz ShahDepartment of Plant Breeding and Genetics, Pir Mehar Ali Shah Arid Agriculture University, Rawalpindi, Pakistan.
Ghazala Kaukab RajaInstitute of Biochemistry and Biotechnology, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi, Pakistan.
Rashid Mehmood RanaDepartment of Plant Breeding and Genetics, Pir Mehar Ali Shah Arid Agriculture University, Rawalpindi, Pakistan.
Tahir MahmoodDepartment of Plant Breeding and Genetics, Pir Mehar Ali Shah Arid Agriculture University, Rawalpindi, Pakistan.
Addie M ThompsonDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States.
Pir Mehr Ali Shah Arid Agriculture University · PKMichigan State University · USPakistan Agricultural Research Council · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Global environmental changes with more extreme episodes of heat waves are major threats to agricultural productivity. Heat stress in spring affects the reproductive stage of maize, resulting in tassel blast, pollen abortion, poor pollination, reduced seed set, barren ears and ultimately yield loss. As an aneamophelous crop, maize has a propensity for pollen abortion under heat stress conditions. To overcome the existing challenges of heat stress and pollen abortion, this study utilized a broad genetic base of maize germplasm to identify superior alleles to be utilized in breeding programs. A panel of 375 inbred lines was morpho-physiologically screened under normal and heat stress conditions in two locations across two consecutive planting seasons, 2017 and 2018. The exposure of pollen to high temperature showed drastic decline in pollen germination percentage. The average pollen germination percentage (PGP) at 35 and 45°C was 40.3% and 9.7%, respectively, an average decline of 30.6%. A subset of 275 inbred lines were sequenced using tunable genotyping by sequencing, resulting in 170,098 single nucleotide polymorphisms (SNPs) after filtration. Genome wide association of PGP in a subset of 122 inbred lines resulted in ten SNPs associated with PGP35°C (

Indexed as

extreme temperatureflowering timegenetic mappingmaizepollen sterilityyield

Identifiers

PMID35368702
PMCPMC8966704
OpenAlexW4220895273

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.