Evidence map›Paper›PMID 35380661›Full record

ArticleGigaScience2022

Living in darkness: Exploring adaptation of Proteus anguinus in 3 dimensions by X-ray imaging.

Markéta Tesařová, Lucia Mancini, Edgardo Mauri, Gregor Aljančič, Magdalena Năpăruş-Aljančič, Rok Kostanjšek, Lilijana Bizjak Mali, Tomáš Zikmund, Markéta Kaucká, Federica Papi and 5 more

Open access · goldAbstract read
In one paragraph

Article in GigaScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Parallel sensory compensation following independent subterranean colonization by groundwater salamanders (Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 10 institutions in 8 countries.

Markéta TesařováCentral European Institute of Technology, Brno University of Technology, Purkyňova 123, Brno, 61200, Czech Republic.ORCID 0000-0002-5200-7365
Lucia ManciniElettra-Sincrotrone Trieste S.C.p.A., S.S. 14 - km 163,5 in Area Science Park, Basovizza, Trieste, 34149, Italy.ORCID 0000-0003-2416-3464
Edgardo MauriSpeleovivarium Erwin Pichl, Adriatic Speleology Society, Via Guido Reni, 2/C, Trieste, 34123, Italy.
Gregor AljančičInstitute Tular Cave Laboratory, Oldhamska 8a, Kranj, 4000, Slovenia.
Magdalena Năpăruş-AljančičInstitute Tular Cave Laboratory, Oldhamska 8a, Kranj, 4000, Slovenia.
Rok KostanjšekUniversity of Ljubljana, Biotechnical Faculty, Department of Biology, Večna pot 111, Ljubljana, 1000, Slovenia.ORCID 0000-0001-8377-1182
Lilijana Bizjak MaliUniversity of Ljubljana, Biotechnical Faculty, Department of Biology, Večna pot 111, Ljubljana, 1000, Slovenia.ORCID 0000-0001-7027-9535
Tomáš ZikmundCentral European Institute of Technology, Brno University of Technology, Purkyňova 123, Brno, 61200, Czech Republic.ORCID 0000-0003-2948-5198
Markéta KauckáMax Planck Institute for Evolutionary Biology, August-Thienemann-Str. 2, Plon, 24306, Germany.ORCID 0000-0002-8781-9769
Federica PapiSpeleovivarium Erwin Pichl, Adriatic Speleology Society, Via Guido Reni, 2/C, Trieste, 34123, Italy.
Jana GoyensLaboratory of Functional Morphology, University of Antwerp, Universiteitsplein 1, Wilrijk, 2610, Belgium.ORCID 0000-0003-0176-884X
Anass BouchnitaDepartment of Information Technology, Uppsala University, Box 337, Uppsala, 755 01, Sweden.ORCID 0000-0002-2729-6484
Andreas HellanderDepartment of Information Technology, Uppsala University, Box 337, Uppsala, 755 01, Sweden.ORCID 0000-0001-7273-7923
Igor AdameykoMedical University of Vienna, Center for Brain Research, Department of Neuroimmunology, Spitalgasse 4, 1090 Vienna, Austria.ORCID 0000-0001-5471-0356
Jozef KaiserCentral European Institute of Technology, Brno University of Technology, Purkyňova 123, Brno, 61200, Czech Republic.ORCID 0000-0002-7397-125X
Central European Institute of Technology · CZNational Institute of Oceanography and Applied Geophysics · ITUniversity of Ljubljana · SIUppsala University · SEElettra-Sincrotrone Trieste S.C.p.A. · ITKarolinska Institutet · SEKranj School Centre · SIMax Planck Institute for Evolutionary Biology · DESlovenian Academy of Sciences and Arts · SIUniversity of Antwerp · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLightless caves can harbour a wide range of living organisms. Cave animals have evolved a set of morphological, physiological, and behavioural adaptations known as troglomorphisms, enabling their survival in the perpetual darkness, narrow temperature and humidity ranges, and nutrient scarcity of the subterranean environment. In this study, we focused on adaptations of skull shape and sensory systems in the blind cave salamander, Proteus anguinus, also known as olm or simply proteus-the largest cave tetrapod and the only European amphibian living exclusively in subterranean environments. This extraordinary amphibian compensates for the loss of sight by enhanced non-visual sensory systems including mechanoreceptors, electroreceptors, and chemoreceptors. We compared developmental stages of P. anguinus with Ambystoma mexicanum, also known as axolotl, to make an exemplary comparison between cave- and surface-dwelling paedomorphic salamanders.

findingsWe used contrast-enhanced X-ray computed microtomography for the 3D segmentation of the soft tissues in the head of P. anguinus and A. mexicanum. Sensory organs were visualized to elucidate how the animal is adapted to living in complete darkness. X-ray microCT datasets were provided along with 3D models for larval, juvenile, and adult specimens, showing the cartilage of the chondrocranium and the position, shape, and size of the brain, eyes, and olfactory epithelium.

conclusionsP. anguinus still keeps some of its secrets. Our high-resolution X-ray microCT scans together with 3D models of the anatomical structures in the head may help to elucidate the nature and origin of the mechanisms behind its adaptations to the subterranean environment, which led to a series of troglomorphisms.

Indexed as

ProteidaeAnimalsCaudataDarknessX-RaysAmbystoma mexicanumaxolotlcave animalmicrotomographyolmProteus anguinussalamandersubterranean adaptationsX-ray microCT

Identifiers

PMID35380661
PMCPMC8982192
OpenAlexW4226328845

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.