Evidence map›Paper›PMID 35406779›Full record

ArticleCells2022

Transcriptomic Profiling of DNA Damage Response in Patient-Derived Glioblastoma Cells before and after Radiation and Temozolomide Treatment.

Mathew Lozinski, Nikola A Bowden, Moira C Graves, Michael Fay, Bryan W Day, Brett W Stringer, Paul A Tooney

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Mathew LozinskiSchool of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Newcastle, NSW 2308, Australia.ORCID 0000-0001-7311-9430
Nikola A BowdenCentre for Drug Repurposing and Medicines Research, University of Newcastle, Newcastle, NSW 2308, Australia.ORCID 0000-0002-6047-1694
Moira C GravesCentre for Drug Repurposing and Medicines Research, University of Newcastle, Newcastle, NSW 2308, Australia.
Michael FayCentre for Drug Repurposing and Medicines Research, University of Newcastle, Newcastle, NSW 2308, Australia.
Bryan W DayQIMR Berghofer Medical Research Institute, Brisbane, QLD 4006, Australia.
Brett W StringerCollege of Medicine and Public Health, Flinders University, Adelaide, SA 5042, Australia.ORCID 0000-0003-4552-9736
Paul A TooneySchool of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Newcastle, NSW 2308, Australia.ORCID 0000-0003-3745-4367
Hunter Medical Research Institute · AUFlinders University · AUQIMR Berghofer Medical Research Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioblastoma is a highly aggressive, invasive and treatment-resistant tumour. The DNA damage response (DDR) provides tumour cells with enhanced ability to activate cell cycle arrest and repair treatment-induced DNA damage. We studied the expression of DDR, its relationship with standard treatment response and patient survival, and its activation after treatment. The transcriptomic profile of DDR pathways was characterised within a cohort of isocitrate dehydrogenase (IDH) wild-type glioblastoma from The Cancer Genome Atlas (TCGA) and 12 patient-derived glioblastoma cell lines. The relationship between DDR expression and patient survival and cell line response to temozolomide (TMZ) or radiation therapy (RT) was assessed. Finally, the expression of 84 DDR genes was examined in glioblastoma cells treated with TMZ and/or RT. Although distinct DDR cluster groups were apparent in the TCGA cohort and cell lines, no significant differences in OS and treatment response were observed. At the gene level, the high expression of

Indexed as

GlioblastomaAntineoplastic Agents, AlkylatingDNA DamageHumansTemozolomideTranscriptomeAntineoplastic Agents, AlkylatingTemozolomideDNA damage responseglioblastomaradiationtemozolomidetreatment resistance

Identifiers

PMID35406779
PMCPMC8997841
OpenAlexW4223610110

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.