Evidence map›Paper›PMID 35447118›Full record

ArticleThe Journal of biological chemistry2022

Identification of distinct N-glycosylation patterns on extracellular vesicles from small-cell and non-small-cell lung cancer cells.

Kiyotaka Kondo, Yoichiro Harada, Miyako Nakano, Takehiro Suzuki, Tomoko Fukushige, Ken Hanzawa, Hirokazu Yagi, Koichi Takagi, Keiko Mizuno, Yasuhide Miyamoto and 7 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 1 country.

Kiyotaka KondoDepartment of Pulmonary Medicine, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Yoichiro HaradaDepartment of Glyco-Oncology and Medical Biochemistry, Osaka International Cancer Institute, Chuo-ku, Osaka, Japan. Electronic address: yoharada3@mc.pref.osaka.jp.
Miyako NakanoGraduate School of Integrated Sciences for Life, Hiroshima University, Higashihiroshima, Japan.
Takehiro SuzukiBiomolecular Characterization Unit, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.
Tomoko FukushigeDepartment of Dermatology, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Ken HanzawaDepartment of Molecular Biology, Osaka International Cancer Institute, Chuo-ku, Osaka, Japan.
Hirokazu YagiGraduate School of Pharmaceutical Sciences, Nagoya City University, Mizuho-ku, Nagoya, Japan.
Koichi TakagiDepartment of Pulmonary Medicine, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Keiko MizunoDepartment of Pulmonary Medicine, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Yasuhide MiyamotoDepartment of Molecular Biology, Osaka International Cancer Institute, Chuo-ku, Osaka, Japan.
Naoyuki TaniguchiDepartment of Glyco-Oncology and Medical Biochemistry, Osaka International Cancer Institute, Chuo-ku, Osaka, Japan.
Koichi KatoGraduate School of Pharmaceutical Sciences, Nagoya City University, Mizuho-ku, Nagoya, Japan; Exploratory Research Center on Life and Living Systems (ExCELLS) and Institute for Molecular Science (IMS), National Institutes of Natural Sciences, Myodaiji, Okazaki, Japan.
Takuro KanekuraDepartment of Dermatology, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Naoshi DohmaeBiomolecular Characterization Unit, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.
Kentaro MachidaDepartment of Pulmonary Medicine, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Ikuro MaruyamaDepartment of Systems Biology in Thromboregulation, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Hiromasa InoueDepartment of Pulmonary Medicine, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan. Electronic address: inoue@m2.kufm.kagoshima-u.ac.jp.
Kagoshima University · JPOsaka International Cancer Institute · JPRIKEN Center for Sustainable Resource Science · JPHiroshima University · JPNagoya City University · JPNational Institutes of Natural Sciences · JPOsaka International Cancer Institute · JP

Funding

Dual CHIP Functions Control Tau Triage In Alzheimer's DiseaseR01AG061188 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COHEN, TODD JONATHAN, SCHISLER, JONATHAN C. · 2019 to 2023
$3.1M
Elucidating The Aberrant TDP-43 Species That Promote NeurodegenerationR01NS105981 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COHEN, TODD JONATHAN · 2018 to 2022
$1.7M
Dissecting the Role of HDAC6 in Alzheimer's PathogenesisR21AG058080 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COHEN, TODD JONATHAN · 2018 to 2019
$428k
NIA NIH HHS R01 AG061188NIA NIH HHS R21 AG058080NINDS NIH HHS R01 NS105981
6 · The paper itself

Abstract

Asparagine-linked glycosylation (N-glycosylation) of proteins in the cancer secretome has been gaining increasing attention as a potential biomarker for cancer detection and diagnosis. Small extracellular vesicles (sEVs) constitute a large part of the cancer secretome, yet little is known about whether their N-glycosylation status reflects known cancer characteristics. Here, we investigated the N-glycosylation of sEVs released from small-cell lung carcinoma (SCLC) and non-small-cell lung carcinoma (NSCLC) cells. We found that the N-glycans of SCLC-sEVs were characterized by the presence of structural units also found in the brain N-glycome, while NSCLC-sEVs were dominated by typical lung-type N-glycans with NSCLC-associated core fucosylation. In addition, lectin-assisted N-glycoproteomics of SCLC-sEVs and NSCLC-sEVs revealed that integrin αV was commonly expressed in sEVs of both cancer cell types, while the epithelium-specific integrin α6β4 heterodimer was selectively expressed in NSCLC-sEVs. Importantly, N-glycomics of the immunopurified integrin α6 from NSCLC-sEVs identified NSCLC-type N-glycans on this integrin subunit. Thus, we conclude that protein N-glycosylation in lung cancer sEVs may potentially reflect the histology of lung cancers.

Indexed as

Carcinoma, Non-Small-Cell LungGlycosylationLung NeoplasmsProtein Processing, Post-TranslationalSmall Cell Lung CarcinomaExtracellular VesiclesHumansPolysaccharidesPolysaccharidesexosome (vesicle)extracellular vesiclesglycomicsglycosylationintegrinslung cancers

Identifiers

PMID35447118
PMCPMC9117544
OpenAlexW4224234601

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.