Evidence map›Paper›PMID 35487218›Full record

ArticleDevelopmental cell2022

Functional genetic screen identifies ITPR3/calcium/RELB axis as a driver of colorectal cancer metastatic liver colonization.

Ryan H Moy, Alexander Nguyen, Jia Min Loo, Norihiro Yamaguchi, Christina M Kajba, Balaji Santhanam, Benjamin N Ostendorf, Y Gloria Wu, Saeed Tavazoie, Sohail F Tavazoie

Open access · greenAbstract read
In one paragraph

Article in Developmental cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Gene expression regulation by CaCellular & molecular biology letters · 2026
    Pooled it
  2. Review
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  14. MedComm · 2024
    Article
  15. Review
  16. Structural titration reveals CaNature communications · 2023
    Article
  17. Microbiome and Metabolomics in Liver Cancer: Scientific Technology.International journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ryan H MoyLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Alexander NguyenLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Jia Min LooLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Norihiro YamaguchiLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Christina M KajbaLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Balaji SanthanamDepartment of Biochemistry and Molecular Biophysics and Department of Systems Biology, Columbia University, New York, NY 10032, USA; Department of Biological Sciences, Columbia University, New York, NY 10027, USA.
Benjamin N OstendorfLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Y Gloria WuLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Saeed TavazoieDepartment of Biochemistry and Molecular Biophysics and Department of Systems Biology, Columbia University, New York, NY 10032, USA; Department of Biological Sciences, Columbia University, New York, NY 10027, USA.
Sohail F TavazoieLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA. Electronic address: sohail.tavazoie@rockefeller.edu.
Rockefeller University · USColumbia University · US

Funding

Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Developing, Demonstrating, and Disseminating Innovative Programs to Achieve Translational SuccessUL1TR001866 · NCATS · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY, KRUEGER, JAMES G · 2016 to 2025
$40.6M
Investigational Cancer Therapeutics Training Program (ICTTP)T32CA009207 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Omar Abdel-Wahab, Alexander Drilon · 1985 to 2026
$13.7M
Single-Cell & Computational Biology CoreU54CA261701 · NCI · ROCKEFELLER UNIVERSITY · PI Sohail F. Tavazoie · 2021 to 2026
$9.1M
Massively parallel mapping of all molecular interactions in a single tubeR01HG009065 · NHGRI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TAVAZOIE, SAEED F · 2015 to 2019
$3.2M
Mapping the regulatory landscape of RNA binding proteins and their causal roles in tumorigenesis and patient survivalR01CA257153 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Saeed F Tavazoie, Sohail F. Tavazoie · 2021 to 2026
$2.7M
Defining the mechanism of inositol 1,4,5-triphosphate receptor-mediated metastatic liver colonization in colorectal cancerK08CA263304 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MOY, RYAN · 2021 to 2025
$1.4M
Howard Hughes Medical InstituteNCATS NIH HHS UL1 TR001866NCI NIH HHS K08 CA263304NCI NIH HHS R01 CA257153NCI NIH HHS T32 CA009207NCI NIH HHS U54 CA261701NHGRI NIH HHS R01 HG009065NIGMS NIH HHS T32 GM007739
6 · The paper itself

Abstract

Metastatic colonization is the primary cause of death from colorectal cancer (CRC). We employed genome-scale in vivo short hairpin RNA (shRNA) screening and validation to identify 26 promoters of CRC liver colonization. Among these genes, we identified a cluster that contains multiple targetable genes, including ITPR3, which promoted liver-metastatic colonization and elicited similar downstream gene expression programs. ITPR3 is a caffeine-sensitive inositol 1,4,5-triphosphate (IP3) receptor that releases calcium from the endoplasmic reticulum and enhanced metastatic colonization by inducing expression of RELB, a transcription factor that is associated with non-canonical NF-κB signaling. Genetic, cell biological, pharmacologic, and clinical association studies revealed that ITPR3 and RELB drive CRC colony formation by promoting cell survival upon substratum detachment or hypoxic exposure. RELB was sufficient to drive colonization downstream of ITPR3. Our findings implicate the ITPR3/calcium/RELB axis in CRC metastatic colony formation and uncover multiple clinico-pathologically associated targetable proteins as drivers of CRC metastatic colonization.

Indexed as

Colorectal NeoplasmsLiver NeoplasmsCalciumHumansInositol 1,4,5-Trisphosphate ReceptorsNF-kappa BTranscription Factor RelBCalciumInositol 1,4,5-Trisphosphate ReceptorsITPR3 protein, humanNF-kappa BRELB protein, humanTranscription Factor RelBcalciumcolorectal cancerhypoxiaITPR3metastasisnon-canonical NF-κBRELB

Identifiers

PMID35487218
PMCPMC9446818
OpenAlexW4224980471

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.