Evidence map›Paper›PMID 35510502›Full record

ArticleJournal of cell science2022

The retromer complex regulates C. elegans development and mammalian ciliogenesis.

Shuwei Xie, Carter Dierlam, Ellie Smith, Ramon Duran, Allana Williams, Angelina Davis, Danita Mathew, Naava Naslavsky, Jyoti Iyer, Steve Caplan

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Shuwei XieDepartment of Biochemistry & Molecular Biology, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Carter DierlamDepartment of Chemistry and Biochemistry, University of Tulsa, Tulsa, OK 74104, USA.
Ellie SmithDepartment of Chemistry and Biochemistry, University of Tulsa, Tulsa, OK 74104, USA.
Ramon DuranDepartment of Chemistry and Biochemistry, University of Tulsa, Tulsa, OK 74104, USA.
Allana WilliamsDepartment of Chemistry and Biochemistry, University of Tulsa, Tulsa, OK 74104, USA.ORCID 0000-0001-7048-9524
Angelina DavisSchool of Science and Mathematics, Tulsa Community College, Tulsa, OK 74115, USA.
Danita MathewDepartment of Chemistry and Biochemistry, University of Tulsa, Tulsa, OK 74104, USA.
Naava NaslavskyDepartment of Biochemistry & Molecular Biology, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Jyoti IyerDepartment of Chemistry and Biochemistry, University of Tulsa, Tulsa, OK 74104, USA.ORCID 0000-0002-0942-6919
Steve CaplanDepartment of Biochemistry & Molecular Biology, University of Nebraska Medical Center, Omaha, NE 68198, USA.ORCID 0000-0001-9445-4297
University of Tulsa · USUniversity of Nebraska Medical Center · USTulsa Community College · US

Funding

Understanding connective tissue development and disease with PDGFR-driven..... P20GM103636 · NIGMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI THOMPSON, LINDA F · 2013 to 2023
$26.9M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Mechanisms and function of endosome-derived tubular carriersR01GM123557 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CAPLAN, STEVEN H · 2017 to 2020
$1.3M
Vesicular Transport Mechanisms in Centrosome Regulation and CiliogenesisR01GM133915 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CAPLAN, STEVEN H · 2020 to 2021
$606k
NIGMS NIH HHS P20 GM103636NIGMS NIH HHS R01 GM123557NIGMS NIH HHS R01 GM133915NIH HHS P40 OD010440
6 · The paper itself

Abstract

The mammalian retromer consists of subunits VPS26 (either VPS26A or VPS26B), VPS29 and VPS35, and a loosely associated sorting nexin (SNX) heterodimer or a variety of other SNX proteins. Despite involvement in yeast and mammalian cell trafficking, the role of retromer in development is poorly understood, and its impact on primary ciliogenesis remains unknown. Using CRISPR/Cas9 editing, we demonstrate that vps-26-knockout worms have reduced brood sizes, impaired vulval development and decreased body length, all of which have been linked to ciliogenesis defects. Although preliminary studies did not identify worm ciliary defects, and impaired development limited additional ciliogenesis studies, we turned to mammalian cells to investigate the role of retromer in ciliogenesis. VPS35 localized to the primary cilium of mammalian cells, and depletion of VPS26, VPS35, VPS29, SNX1, SNX2, SNX5 or SNX27 led to decreased ciliogenesis. Retromer also coimmunoprecipitated with the centriolar protein, CP110 (also known as CCP110), and was required for its removal from the mother centriole. Herein, we characterize new roles for retromer in C. elegans development and in the regulation of ciliogenesis in mammalian cells, suggesting a novel role for retromer in CP110 removal from the mother centriole.

Indexed as

EndosomesVesicular Transport ProteinsAnimalsCaenorhabditis elegansMammalsProtein TransportSorting NexinsSorting NexinsVesicular Transport ProteinsCentrosomeCiliogenesisCP110RetromerSNX1SNX2SNX27SNX5VPS26VPS29VPS35

Identifiers

PMID35510502
PMCPMC9189432
OpenAlexW4229016933

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.