Evidence map›Paper›PMID 35514995›Full record

ArticleFrontiers in immunology2022

A Protective HLA Extended Haplotype Outweighs the Major COVID-19 Risk Factor Inherited From Neanderthals in the Sardinian Population.

Stefano Mocci, Roberto Littera, Stefania Tranquilli, Aldesia Provenzano, Alessia Mascia, Federica Cannas, Sara Lai, Erika Giuressi, Luchino Chessa, Goffredo Angioni and 6 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Stefano MocciMedical Genetics Unit, Department of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Roberto LitteraMedical Genetics Unit, R. Binaghi Hospital, Local Public Health and Social Care Unit (ASSL) of Cagliari, Cagliari, Italy.
Stefania TranquilliMedical Genetics Unit, Department of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Aldesia ProvenzanoMedical Genetics Unit, Department of Experimental and Clinical Biomedical Sciences "Mario Serio", University of Florence, Florence, Italy.
Alessia MasciaMedical Genetics Unit, Department of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Federica CannasMedical Genetics Unit, Department of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Sara LaiMedical Genetics Unit, R. Binaghi Hospital, Local Public Health and Social Care Unit (ASSL) of Cagliari, Cagliari, Italy.
Erika GiuressiMedical Genetics Unit, R. Binaghi Hospital, Local Public Health and Social Care Unit (ASSL) of Cagliari, Cagliari, Italy.
Luchino ChessaAssociation for the Advancement of Research on Transplantation O.d.V., Non Profit Organisation, Cagliari, Italy.
Goffredo AngioniStructure of Infectious Diseases Unit, SS Trinità Hospital, Cagliari, Italy.
Marcello CampagnaDepartment of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Davide FirinuDepartment of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Maria Del ZompoDepartment of Biomedical Sciences, University of Cagliari, Cagliari, Italy.
Giorgio La NasaHematology Unit, Businco Hospital, Department of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Andrea PerraAssociation for the Advancement of Research on Transplantation O.d.V., Non Profit Organisation, Cagliari, Italy.
Sabrina GiglioMedical Genetics Unit, Department of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
University of Cagliari · ITSantissima Trinità · ITUniversity of Florence · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sardinia has one of the lowest incidences of hospitalization and related mortality in Europe and yet a very high frequency of the Neanderthal risk locus variant on chromosome 3 (rs35044562), considered to be a major risk factor for a severe SARS-CoV-2 disease course. We evaluated 358 SARS-CoV-2 patients and 314 healthy Sardinian controls. One hundred and twenty patients were asymptomatic, 90 were pauci-symptomatic, 108 presented a moderate disease course and 40 were severely ill. All patients were analyzed for the Neanderthal-derived genetic variants reported as being protective (rs1156361) or causative (rs35044562) for severe illness. The β°39 C>T Thalassemia variant (rs11549407

Indexed as

COVID-19NeanderthalsAnimalsHaplotypesHumansRisk FactorsSARS-CoV-2B*18:01COVID-19DRB*03 extended haplotypeHLA-A*02:01Neanderthal Covid-19 risk haplotypers35044562 variantSARS-CoV-2

Identifiers

PMID35514995
PMCPMC9063452
OpenAlexW4224251558

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.