Evidence map›Paper›PMID 35529950›Full record

ArticlePlant communications2022

Structure of a cereal purple acid phytase provides new insights to phytate degradation in plants.

Raquel Faba-Rodriguez, Yinghong Gu, Melissa Salmon, Giuseppe Dionisio, Henrik Brinch-Pedersen, Charles A Brearley, Andrew M Hemmings

Open access · goldAbstract read
In one paragraph

Article in Plant communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Enzyme immobilization with plant-based polysaccharides through complex coacervation.Lebensmittel-Wissenschaft + [i.e. und] Technologie. Food science + technology. Science + technologie alimentaire · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Insights to the Structural Basis for the Stereospecificity of theInternational journal of molecular sciences · 2022
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Raquel Faba-RodriguezSchool of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Yinghong GuSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Melissa SalmonSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Giuseppe DionisioDepartment of Agroecology, Research Center Flakkebjerg, Aarhus University, 4200 Slagelse, Denmark.
Henrik Brinch-PedersenDepartment of Agroecology, Research Center Flakkebjerg, Aarhus University, 4200 Slagelse, Denmark.
Charles A BrearleySchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Andrew M HemmingsSchool of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
University of East Anglia · GBAarhus University · DK

Funding

Biotechnology and Biological Sciences Research Council BB/M022978/1
6 · The paper itself

Abstract

Grain phytate, a mixed metal ion salt of inositol hexakisphosphate, accounts for 60%-80% of stored phosphorus in plants and is a potent antinutrient of non-ruminant animals including humans. Through neofunctionalization of purple acid phytases (PAPhy), some cereals such as wheat and rye have acquired particularly high mature grain phytase activity. As PAPhy activity supplies phosphate, liberates metal ions necessary for seedling emergence, and obviates antinutrient effects of phytate, its manipulation and control are targeted crop traits. Here we show the X-ray crystal structure of the b2 isoform of wheat PAPhy induced during germination. This high-resolution crystal structure suggests a model for phytate recognition that, validated by molecular dynamics simulations, implicates elements of two sequence inserts (termed PAPhy motifs) relative to a canonical metallophosphoesterase (MPE) domain in forming phytate-specific substrate specificity pockets. These motifs are well conserved in PAPhys from monocot cereals, enzymes which are characterized by high specificity for phytate. Tested by mutagenesis, residues His229 in PAPhy motif 4 and Lys410 in the MPE domain, both conserved in PAPhys, are found to strongly influence phytase activity. These results explain the observed phytase activity of cereal PAPhys and open the way to the rational engineering of phytase activity

Indexed as

6-PhytaseAnimalsEdible GrainGerminationPhytic AcidTriticum6-PhytasePhytic Acidpurple acid phytasestereospecificitywheatX-ray crystallography

Identifiers

PMID35529950
PMCPMC9073318
OpenAlexW4212763754

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.