Evidence map›Paper›PMID 35539409›Full record

ArticleRSC advances2018

Transcriptome analysis reveals GA induced apoptosis in HCT116 human colon cancer cells through calcium and p53 signal pathways.

Chen Yang, Xiaoyu Xie, Hu Tang, Xuyan Dong, Xiaodong Zhang, Fenghong Huang

Open access · goldAbstract read
In one paragraph

Article in RSC advances, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. New Evidence forPharmaceuticals (Basel, Switzerland) · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Extract ofEvidence-based complementary and alternative medicine : eCAM · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Chen YangOil Crops Research Institute, Chinese Academy of Agricultural Sciences Wuhan 430062 P. R. China yangchen@caas.cn huangfh@oilcrops.cn.ORCID https://orcid.org/0000-0002-3314-5252
Xiaoyu XieDepartment of Cell Biology, College of Life Sciences, Wuhan University Wuhan 430072 P. R. China.
Hu TangOil Crops Research Institute, Chinese Academy of Agricultural Sciences Wuhan 430062 P. R. China yangchen@caas.cn huangfh@oilcrops.cn.ORCID https://orcid.org/0000-0001-5968-3756
Xuyan DongOil Crops Research Institute, Chinese Academy of Agricultural Sciences Wuhan 430062 P. R. China yangchen@caas.cn huangfh@oilcrops.cn.
Xiaodong ZhangDepartment of Cell Biology, College of Life Sciences, Wuhan University Wuhan 430072 P. R. China.
Fenghong HuangOil Crops Research Institute, Chinese Academy of Agricultural Sciences Wuhan 430062 P. R. China yangchen@caas.cn huangfh@oilcrops.cn.
Indian Institute of Oilseeds Research · INWuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gallic acid (GA) is a polyphenol widely found in numerous fruits and vegetables that has been reported to exert anticancer effects, including apoptosis, against cancer cell lines. However, little is known about the induction of apoptotic effects and the underlying mechanism. We used RNA-seq to examine differentially expressed genes in human colon cancer HCT116 cells after 12 h and 24 h exposure to GA. A total of 792 and 911 genes with known functions showed significantly different expression levels in 12 h and 24 h GA-treated HCT116 cells, respectively. KEGG enrichment analysis showed that the identified genes were involved in pathways such as cholinergic synapse, circadian entrainment, calcium signal processing and transport, arachidonic acid metabolism and the p53 signal pathway. Real-time quantitative PCR was used to validate the reliability of the results obtained by RNA-seq. The results of this study indicate that GA triggers apoptosis in HCT116 cells through obstructing the growth of cells in the early phase treatment by down-regulation of calcium channels and then up-regulation of the intrinsic p53 signal pathway through activation of apoptosis caspases, finally leading to the mitochondrial apoptosis pathway.

Identifiers

PMID35539409
PMCPMC9079613
OpenAlexW2795620666

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.