Evidence map›Paper›PMID 35545927›Full record

ArticleVeterinary medicine and science2022

Genetic diversity in reproductive traits of Braunvieh cattle determined with SNP markers.

Mitzilin Zuleica Trujano-Chavez, Agustín Ruíz-Flores, Rufino López-Ordaz, Paulino Pérez-Rodríguez

Open access · goldAbstract read
In one paragraph

Article in Veterinary medicine and science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Mitzilin Zuleica Trujano-ChavezPosgrado en Producción Animal, Universidad Autónoma Chapingo, Texcoco, Estado de México, Mexico.ORCID 0000-0002-3242-1040
Agustín Ruíz-FloresPosgrado en Producción Animal, Universidad Autónoma Chapingo, Texcoco, Estado de México, Mexico.ORCID 0000-0001-8267-2107
Rufino López-OrdazPosgrado en Producción Animal, Universidad Autónoma Chapingo, Texcoco, Estado de México, Mexico.ORCID 0000-0001-6077-783X
Paulino Pérez-RodríguezSocio Economía Estadística e Informática, Colegio de Postgraduados, Texcoco, Estado de México, Mexico.ORCID 0000-0002-3202-1784
Chapingo Autonomous University · MXColegio de Postgraduados · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Braunvieh is an important dual-purpose breed in the Mexican tropics. The study of its genetic diversity is key to implementing genetic improvement programs. This study was conducted to determine genetic diversity of reproductive traits in a Mexican Braunvieh beef cattle population using single nucleotide polymorphisms in candidate genes. Information from 24 genes with 52 intra-genic loci reported in literature to be associated with productive life, pregnancy rate and cow and heifer conception rate of 150 Braunvieh males and females was considered. Observed heterozygosity (Ho) revealed high genetic diversity for the studied traits, Ho = 0.42 ± 0.087, relative to that of other populations of the same breed. Cluster analyses were carried out using the Ward and K-means algorithms. These analyses revealed high genetic diversity that was observed in the biplot of non-metric multi-dimensional scaling. It was found that clustering strategy allowed visualisation of distant groups by genotype but not by favourable alleles in all the loci. We found that the genes CSNK1E, DNAH11, DSC2, IBSP and OCLN affected most of the traits in our study and they were highly informative. Therefore, they represent a potential resource for selection and crossbreeding programs of the traits studied in Braunvieh. The analyses showed that the Mexican Braunvieh population has a high level of genetic diversity, arguably due to decades-long adaptation to the Mexican tropics.

Indexed as

Polymorphism, Single NucleotideReproductionAllelesAnimalsCattleFemaleGenotypeMalePhenotypePregnancyBrown Swisscandidate genecluster analysisgenetic variability

Identifiers

PMID35545927
PMCPMC9297803
OpenAlexW4280527539

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.