Evidence map›Paper›PMID 35550065›Full record

ArticleNeuron2022

Targeted proteoform mapping uncovers specific Neurexin-3 variants required for dendritic inhibition.

David Hauser, Katharina Behr, Kohtarou Konno, Dietmar Schreiner, Alexander Schmidt, Masahiko Watanabe, Josef Bischofberger, Peter Scheiffele

Abstract read
In one paragraph

Article in Neuron, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Alpha-neurexins in health and disease.Frontiers in molecular neuroscience · 2025
    Review
  8. Article
  9. Cell Adhesion Molecule Signaling at the Synapse: Beyond the Scaffold.Cold Spring Harbor perspectives in biology · 2024
    Review
  10. Article
  11. Article
  12. Presynaptic Nrxn3 is essential for ribbon-synapse assembly in hair cells.bioRxiv : the preprint server for biology · 2024
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

David HauserBiozentrum of the University of Basel, Spitalstrasse 41, 4056 Basel, Switzerland.
Katharina BehrDepartment of Biomedicine, University of Basel, Pestalozzistrasse 20, 4056 Basel, Switzerland.
Kohtarou KonnoDepartment of Anatomy, Faculty of Medicine, Hokkaido University, Sapporo, Japan.
Dietmar SchreinerBiozentrum of the University of Basel, Spitalstrasse 41, 4056 Basel, Switzerland.
Alexander SchmidtBiozentrum of the University of Basel, Spitalstrasse 41, 4056 Basel, Switzerland.
Masahiko WatanabeDepartment of Anatomy, Faculty of Medicine, Hokkaido University, Sapporo, Japan.
Josef BischofbergerDepartment of Biomedicine, University of Basel, Pestalozzistrasse 20, 4056 Basel, Switzerland.
Peter ScheiffeleBiozentrum of the University of Basel, Spitalstrasse 41, 4056 Basel, Switzerland. Electronic address: peter.scheiffele@unibas.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The diversification of cell adhesion molecules by alternative splicing is proposed to underlie molecular codes for neuronal wiring. Transcriptomic approaches mapped detailed cell-type-specific mRNA splicing programs. However, it has been hard to probe the synapse-specific localization and function of the resulting protein splice isoforms, or "proteoforms," in vivo. We here apply a proteoform-centric workflow in mice to test the synapse-specific functions of the splice isoforms of the synaptic adhesion molecule Neurexin-3 (NRXN3). We uncover a major proteoform, NRXN3 AS5, that is highly expressed in GABAergic interneurons and at dendrite-targeting GABAergic terminals. NRXN3 AS5 abundance significantly diverges from Nrxn3 mRNA distribution and is gated by translation-repressive elements. Nrxn3 AS5 isoform deletion results in a selective impairment of dendrite-targeting interneuron synapses in the dentate gyrus without affecting somatic inhibition or glutamatergic perforant-path synapses. This work establishes cell- and synapse-specific functions of a specific neurexin proteoform and highlights the importance of alternative splicing regulation for synapse specification.

Indexed as

Alternative SplicingNerve Tissue ProteinsAnimalsCell Adhesion MoleculesMiceProtein IsoformsRNA, MessengerSynapsesCell Adhesion MoleculesNerve Tissue ProteinsProtein IsoformsRNA, Messengeralternative splicingautismGABAinterneuronneuronal circuitproteoformRNAsynaptic adhesionsynaptic specificitytargeted proteomics

Identifiers

PMID35550065
PMCPMC9275415

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.