Evidence map›Paper›PMID 35551368›Full record

ArticleThe Journal of experimental medicine2022

GIMAP6 regulates autophagy, immune competence, and inflammation in mice and humans.

Yikun Yao, Ping Du Jiang, Brittany N Chao, Deniz Cagdas, Satoshi Kubo, Arasu Balasubramaniyam, Yu Zhang, Bella Shadur, Adeeb NaserEddin, Les R Folio and 34 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Nasal administration of anti-CD3 mAb (Foralumab) downregulatesProceedings of the National Academy of Sciences of the United States of America · 2023
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  4. Immunoregulatory genebioRxiv : the preprint server for biology · 2026
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  9. AMBRA1 controls the translation of immune-specific genes in T lymphocytes.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. The goat pan-genome reveals patterns of gene loss during domestication.Journal of animal science and biotechnology · 2024
    Article
  11. Spatial multiomics of arterial regions from cardiac allograft vasculopathy rejected grafts reveal novel insights into the pathogenesis of chronic antibody-mediated rejection.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors at 14 institutions in 6 countries.

Yikun Yao *Molecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0002-8890-2409
Ping Du Jiang *Molecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0002-9900-8277
Brittany N Chao *Molecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0002-0355-2332
Deniz Cagdas *Division of Immunology, Department of Pediatrics, Hacettepe University Faculty of Medicine, Ankara, Turkey.ORCID 0000-0003-2213-4627
Satoshi KuboMolecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0001-9693-9263
Arasu BalasubramaniyamCrystallography, Max-Delbrück-Centrum for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID 0000-0003-4168-8617
Yu ZhangHuman Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, National Institute of Allergy and Infectious Diseases, Rockville, MD.ORCID 0000-0002-6904-0372
Bella ShadurHadassah University Medical Center, Department of Bone Marrow Transplantation and Cancer Immunotherapy, Jerusalem, Israel.ORCID 0000-0003-0245-894X
Adeeb NaserEddinHadassah University Medical Center, Department of Bone Marrow Transplantation and Cancer Immunotherapy, Jerusalem, Israel.ORCID 0000-0001-6995-3262
Les R FolioClinical Center, National Institutes of Health, Bethesda, MD.
Benjamin SchwarzLaboratory of Bacteriology, National Institute of Allergy and Infectious Diseases, Rockville, MD.ORCID 0000-0002-5894-953X
Eric BohrnsenLaboratory of Bacteriology, National Institute of Allergy and Infectious Diseases, Rockville, MD.ORCID 0000-0003-4327-5242
Lixin ZhengMolecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0002-8838-8665
Matthew LynbergMolecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0003-1371-3002
Simone GottliebMolecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0003-0550-4761
Michael A Leney-GreeneMolecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0002-3259-1728
Ann Y ParkMolecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0002-0130-1521
Ilhan TezcanDivision of Immunology, Department of Pediatrics, Hacettepe University Faculty of Medicine, Ankara, Turkey.ORCID 0000-0001-7257-4554
Ali AkdoganDivision of Rheumatology, Department of Internal Medicine, Hacettepe University Faculty of Medicine, Ankara, Turkey.
Rahsan GocmenDepartment of Radiology, Hacettepe University Faculty of Medicine, Ankara, Turkey.ORCID 0000-0002-0223-9336
Sevgen OnderDepartment of Pathology, Hacettepe University Faculty of Medicine, Ankara, Turkey.ORCID 0000-0002-5523-0669
Avi RosenbergKidney Diseases Branch, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD.
Elizabeth J SoilleuxDepartment of Pathology, University of Cambridge, Cambridge, UK.ORCID 0000-0002-4032-7249
Errin JohnsonThe Dunn School of Pathology, South Parks Road, Oxford, UK.ORCID 0000-0001-8435-9472
Peter K JacksonBaxter Laboratory, Departments of Microbiology & Immunology and Pathology Stanford University School of Medicine, Stanford, CA.ORCID 0000-0002-1742-2539
Janos DemeterBaxter Laboratory, Departments of Microbiology & Immunology and Pathology Stanford University School of Medicine, Stanford, CA.ORCID 0000-0002-7301-8055
Samuel D ChauvinMolecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0003-0232-751X
Florian PaulCrystallography, Max-Delbrück-Centrum for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID 0000-0001-5181-3122
Matthias SelbachCrystallography, Max-Delbrück-Centrum for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID 0000-0003-2454-8751
Haydar BulutCrystallography, Max-Delbrück-Centrum for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID 0000-0003-0262-6296
Menna R ClatworthyMolecular Immunity Unit, University of Cambridge Department of Medicine, Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0002-3340-9828
Zewen K TuongMolecular Immunity Unit, University of Cambridge Department of Medicine, Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0002-6735-6808
Hanlin ZhangKennedy Institute of Rheumatology, University of Oxford, Roosevelt Drive, Oxford, UK.
Benjamin J StewartMolecular Immunity Unit, University of Cambridge Department of Medicine, Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0003-4522-0085
Catharine M BosioLaboratory of Bacteriology, National Institute of Allergy and Infectious Diseases, Rockville, MD.ORCID 0000-0002-7332-9611
Polina StepenskyHadassah University Medical Center, Department of Bone Marrow Transplantation and Cancer Immunotherapy, Jerusalem, Israel.ORCID 0000-0002-4923-3660
Simon ClareHost-Microbiota Interactions Laboratory, Wellcome Sanger Institute, Hinxton, UK.ORCID 0000-0001-9368-6037
Sundar GanesanBiological Imaging Section, Research Technologies Branch, National Institute of Allergy and Infectious Diseases, Rockville, MD.ORCID 0000-0003-1132-2016
John C PascallLaboratory of Lymphocyte Signalling and Development, Babraham Institute, Babraham Research Campus, Cambridge, UK.ORCID 0000-0002-9506-1441
Oliver DaumkeCrystallography, Max-Delbrück-Centrum for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID 0000-0002-6190-1414
Geoffrey W ButcherLaboratory of Lymphocyte Signalling and Development, Babraham Institute, Babraham Research Campus, Cambridge, UK.ORCID 0000-0002-3423-7124
Andrew J McMichael *Nuffield Department of Medicine Research Building, Roosevelt Drive, Nuffield Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0002-9101-7478
Anna Katharina Simon *Kennedy Institute of Rheumatology, University of Oxford, Roosevelt Drive, Oxford, UK.ORCID 0000-0002-4077-7995
Michael J Lenardo *Molecular Development of the Immune System Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0003-1584-468X
National Institutes of Health · USMax Delbrück Center · DENational Institute of Allergy and Infectious Diseases · USHacettepe University · TRMRC Laboratory of Molecular Biology · GBUniversity of Oxford · GBBabraham Institute · GBHacettepe University Hospital · TRHadassah Medical Center · ILStanford University · USGarvan Institute of Medical Research · AUNational Institutes of Health Clinical Center · USUniversity of Cambridge · GBWellcome Sanger Institute · GB

Funding

Infectious Diseases Research Technologies Core - BethesdaZICAI001051 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI CHERRY, JAMES · 2009 to 2025
$226.1M
Immunity to Pulmonary InfectionsZIAAI001013 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BOSIO, CATHARINE · 2009 to 2025
$18.9M
Molecular Mechanisms Of The Autoimmune Lymphoproliferative Syndrome And Other Immunoregulatory DisordersZIAAI000769 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI SU, HELEN · 2009 to 2024
$16.7M
German Research Foundation 958Hacettepe University Coordination Unit for Scientific Research ProjectsNational Institute of Allergy and Infectious DiseasesNHLBI NIH HHSOxford University
6 · The paper itself

Abstract

Inborn errors of immunity (IEIs) unveil regulatory pathways of human immunity. We describe a new IEI caused by mutations in the GTPase of the immune-associated protein 6 (GIMAP6) gene in patients with infections, lymphoproliferation, autoimmunity, and multiorgan vasculitis. Patients and Gimap6-/- mice show defects in autophagy, redox regulation, and polyunsaturated fatty acid (PUFA)-containing lipids. We find that GIMAP6 complexes with GABARAPL2 and GIMAP7 to regulate GTPase activity. Also, GIMAP6 is induced by IFN-γ and plays a critical role in antibacterial immunity. Finally, we observed that Gimap6-/- mice died prematurely from microangiopathic glomerulosclerosis most likely due to GIMAP6 deficiency in kidney endothelial cells.

Indexed as

GTP PhosphohydrolasesImmunologic Deficiency SyndromesAnimalsAutophagyEndothelial CellsHumansInflammationMiceGIMAP6 protein, humanGTP Phosphohydrolases

Identifiers

PMID35551368
PMCPMC9111091
OpenAlexW4280612258

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.