Evidence map›Paper›PMID 35568031›Full record

ArticleAmerican journal of human genetics2022

Analysis of MRI-derived spleen iron in the UK Biobank identifies genetic variation linked to iron homeostasis and hemolysis.

Elena P Sorokin, Nicolas Basty, Brandon Whitcher, Yi Liu, Jimmy D Bell, Robert L Cohen, Madeleine Cule, E Louise Thomas

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Review
  3. Genetic analysis of imaging-derived phenotypes.Nature reviews. Genetics · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Genetic Markers of Postmortem Brain Iron.Journal of neurochemistry · 2025
    Article
  8. Influences of the second motion probing gradientQuantitative imaging in medicine and surgery · 2025
    Article
  9. Article
  10. Multi-organ imaging-derived polygenic indexes for brain and body health.medRxiv : the preprint server for health sciences · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Elena P SorokinCalico Life Sciences LLC, South San Francisco, CA, USA. Electronic address: sorokin@calicolabs.com.
Nicolas BastyResearch Centre for Optimal Health, School of Life Sciences, University of Westminster, London, UK.
Brandon WhitcherResearch Centre for Optimal Health, School of Life Sciences, University of Westminster, London, UK.
Yi LiuCalico Life Sciences LLC, South San Francisco, CA, USA.
Jimmy D BellResearch Centre for Optimal Health, School of Life Sciences, University of Westminster, London, UK.
Robert L CohenCalico Life Sciences LLC, South San Francisco, CA, USA.
Madeleine CuleCalico Life Sciences LLC, South San Francisco, CA, USA.
E Louise ThomasResearch Centre for Optimal Health, School of Life Sciences, University of Westminster, London, UK. Electronic address: l.thomas3@westminster.ac.uk.
University of Westminster · GBCalithera (United States) · US

Funding

Medical Research Council MC_PC_17228Medical Research Council MC_QA137853
6 · The paper itself

Abstract

The spleen plays a key role in iron homeostasis. It is the largest filter of the blood and performs iron reuptake from old or damaged erythrocytes. Despite this role, spleen iron concentration has not been measured in a large, population-based cohort. In this study, we quantify spleen iron in 41,764 participants of the UK Biobank by using magnetic resonance imaging and provide a reference range for spleen iron in an unselected population. Through genome-wide association study, we identify associations between spleen iron and regulatory variation at two hereditary spherocytosis genes, ANK1 and SPTA1. Spherocytosis-causing coding mutations in these genes are associated with lower reticulocyte volume and increased reticulocyte percentage, while these common alleles are associated with increased expression of ANK1 and SPTA1 in blood and with larger reticulocyte volume and reduced reticulocyte percentage. As genetic modifiers, these common alleles may explain mild spherocytosis phenotypes that have been observed clinically. Our genetic study also identifies a signal that co-localizes with a splicing quantitative trait locus for MS4A7, and we show this gene is abundantly expressed in the spleen and in macrophages. The combination of deep learning and efficient image processing enables non-invasive measurement of spleen iron and, in turn, characterization of genetic factors related to the lytic phase of the erythrocyte life cycle and iron reuptake in the spleen.

Indexed as

HemolysisSpherocytosis, HereditaryBiological Specimen BanksCytoskeletal ProteinsGenome-Wide Association StudyHomeostasisHumansIronMagnetic Resonance ImagingMutationSpleenUnited KingdomCytoskeletal ProteinsIrongenome-wide association studyhemolytic anemiahereditary spherocytosishuman iron economyimaging-derived phenotypeiron homeostasismagnetic resonance imagingquantitative traitsrare variant association studyspleen iron

Identifiers

PMID35568031
PMCPMC9247824
OpenAlexW4280494276

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.