Evidence map›Paper›PMID 35580607›Full record

ArticleCell metabolism2022

Comparative transcriptomics reveals circadian and pluripotency networks as two pillars of longevity regulation.

J Yuyang Lu, Matthew Simon, Yang Zhao, Julia Ablaeva, Nancy Corson, Yongwook Choi, KayLene Y H Yamada, Nicholas J Schork, Wendy R Hood, Geoffrey E Hill and 3 more

Open access · greenAbstract read
In one paragraph

Article in Cell metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
6.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Evolutionary genetics of ageing.Nature reviews. Genetics · 2026
    Review
  3. Review
  4. Article
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  6. Article
  7. Molecular evolution of animal aging.The EMBO journal · 2026
    Review
  8. Photoreceptor control ofProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. The Implications of Alternative Splicing Regulation for Maximum Lifespan.bioRxiv : the preprint server for biology · 2025
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

J Yuyang LuDepartment of Biology, University of Rochester, Rochester, NY 14627, USA.
Matthew SimonDepartment of Biology, University of Rochester, Rochester, NY 14627, USA.
Yang ZhaoDepartment of Biology, University of Rochester, Rochester, NY 14627, USA.
Julia AblaevaDepartment of Biology, University of Rochester, Rochester, NY 14627, USA.
Nancy CorsonDepartment of Biology, University of Rochester, Rochester, NY 14627, USA.
Yongwook ChoiQuantitative Medicine and Systems Biology Division, Translational Genomics Research Institute, Phoenix, AZ 85004, USA.
KayLene Y H YamadaDepartment of Biological Sciences, Auburn University, Auburn, AL 36849, USA.
Nicholas J SchorkQuantitative Medicine and Systems Biology Division, Translational Genomics Research Institute, Phoenix, AZ 85004, USA.
Wendy R HoodDepartment of Biological Sciences, Auburn University, Auburn, AL 36849, USA.
Geoffrey E HillDepartment of Biological Sciences, Auburn University, Auburn, AL 36849, USA.
Richard A MillerDepartment of Pathology and Geriatrics Center, University of Michigan, Ann Arbor, MI 48109, USA.
Andrei SeluanovDepartment of Biology, University of Rochester, Rochester, NY 14627, USA. Electronic address: andrei.seluanov@rochester.edu.
Vera GorbunovaDepartment of Biology, University of Rochester, Rochester, NY 14627, USA. Electronic address: vera.gorbunova@rochester.edu.
University of Rochester · USAuburn University · USTranslational Genomics Research Institute · USUniversity of Michigan–Ann Arbor · US

Funding

The role of hyaluronan in longevity and cancer resistance of longest-lived rodentP01AG047200 · NIA · UNIVERSITY OF ROCHESTER · PI Andrei Seluanov · 2014 to 2026
$36.9M
Research Education CoreP30AG024824 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Neil Alexander · 2004 to 2026
$29.2M
Laboratory for Anti-Geric Testing, Evaluation and ResearchU01AG022303 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RICHARD A MILLER · 2003 to 2026
$25.4M
The role of SIRT6 posttranslational modifications in aging and genome stability. Supplement: Testing SIRT6 activators as potential Alzheimer's disease therapy.R01AG027237 · NIA · UNIVERSITY OF ROCHESTER · PI Vera Gorbunova · 2006 to 2026
$6.2M
Regulation of epigenome stability by SIRT6 during aging. Supplement: Does centenarian variant of SIRT6 or bowhead whale SIRT6 confer protection from Alzheimer's disease?R37AG046320 · NIA · UNIVERSITY OF ROCHESTER · PI Andrei Seluanov · 2019 to 2026
$4.7M
Integrative Omics to enhance therapeutics development for healthy agingUH3AG064706 · NIA · TRANSLATIONAL GENOMICS RESEARCH INST · PI MILLER, RICHARD A, SCHORK, NICHOLAS JOSEPH · 2021 to 2024
$3.3M
NIA NIH HHS P01 AG047200NIA NIH HHS P30 AG024824NIA NIH HHS R01 AG027237NIA NIH HHS R37 AG046320NIA NIH HHS U01 AG022303NIA NIH HHS UH3 AG064706
6 · The paper itself

Abstract

Mammals differ more than 100-fold in maximum lifespan. Here, we conducted comparative transcriptomics on 26 species with diverse lifespans. We identified thousands of genes with expression levels negatively or positively correlated with a species' maximum lifespan (Neg- or Pos-MLS genes). Neg-MLS genes are primarily involved in energy metabolism and inflammation. Pos-MLS genes show enrichment in DNA repair, microtubule organization, and RNA transport. Expression of Neg- and Pos-MLS genes is modulated by interventions, including mTOR and PI3K inhibition. Regulatory networks analysis showed that Neg-MLS genes are under circadian regulation possibly to avoid persistent high expression, whereas Pos-MLS genes are targets of master pluripotency regulators OCT4 and NANOG and are upregulated during somatic cell reprogramming. Pos-MLS genes are highly expressed during embryogenesis but significantly downregulated after birth. This work provides targets for anti-aging interventions by defining pathways correlating with longevity across mammals and uncovering circadian and pluripotency networks as central regulators of longevity.

Indexed as

LongevityTranscriptomeAgingAnimalsDNA RepairMammalsagingcircadian clockcomparative transcriptomicsepigenetic reprogrammingfunctional genomicslongevitypluripotency

Identifiers

PMID35580607
PMCPMC9364679
OpenAlexW4280524598

What Socratic holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.