Evidence map›Paper›PMID 35593701›Full record

ArticleeLife2022

Visceral organ morphogenesis via calcium-patterned muscle constrictions.

Noah P Mitchell, Dillon J Cislo, Suraj Shankar, Yuzheng Lin, Boris I Shraiman, Sebastian J Streichan

Abstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Topology and kinetic pathways of colloidosome assembly and disassembly.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. The Mechanics of Building Functional Organs.Cold Spring Harbor perspectives in biology · 2025
    Review
  7. Stochastic morphological swings inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Mechanics of Drosophila wing deployment.Nature communications · 2024
    Article
  9. Article
  10. Active shape programming drivesScience advances · 2024
    Article
  11. Article
  12. Spiking at the edge: Excitability at interfaces in reaction-diffusion systems.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Review
  15. Article
  16. Patterning of morphogenetic anisotropy fields.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Morphogenetic Roles of Hydrostatic Pressure in Animal Development.Annual review of cell and developmental biology · 2022
    Review
  18. Controlling the shape and topology of two-component colloidal membranes.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Noah P MitchellKavli Institute for Theoretical Physics, University of California, Santa Barbara, Santa Barbara, United States.ORCID 0000-0003-1922-8470
Dillon J CisloDepartment of Physics, University of California, Santa Barbara, Santa Barbara, United States.
Suraj ShankarKavli Institute for Theoretical Physics, University of California, Santa Barbara, Santa Barbara, United States.ORCID 0000-0002-4615-975X
Yuzheng LinDepartment of Physics, University of California, Santa Barbara, Santa Barbara, United States.
Boris I ShraimanKavli Institute for Theoretical Physics, University of California, Santa Barbara, Santa Barbara, United States.ORCID 0000-0003-0886-8990
Sebastian J StreichanDepartment of Physics, University of California, Santa Barbara, Santa Barbara, United States.ORCID 0000-0002-6105-9087

Funding

Physics of Living Matter: From Molecule to Embryo.R35GM138203 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI Sebastian J Streichan · 2020 to 2026
$2.7M
Tissue flow genetics: using cartography to reveal forces driving morphogenesisR00HD088708 · NICHD · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI STREICHAN, SEBASTIAN J · 2018 to 2020
$659k
Tissue flow genetics: using cartography to reveal forces driving morphogenesisK99HD088708 · NICHD · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI STREICHAN, SEBASTIAN J · 2016 to 2017
$287k
NICHD NIH HHS K99 HD088708NICHD NIH HHS R00 HD088708NIGMS NIH HHS R35 GM138203
6 · The paper itself

Abstract

Organ architecture is often composed of multiple laminar tissues arranged in concentric layers. During morphogenesis, the initial geometry of visceral organs undergoes a sequence of folding, adopting a complex shape that is vital for function. Genetic signals are known to impact form, yet the dynamic and mechanical interplay of tissue layers giving rise to organs' complex shapes remains elusive. Here, we trace the dynamics and mechanical interactions of a developing visceral organ across tissue layers, from subcellular to organ scale in vivo. Combining deep tissue light-sheet microscopy for in toto live visualization with a novel computational framework for multilayer analysis of evolving complex shapes, we find a dynamic mechanism for organ folding using the embryonic midgut of

Indexed as

CalciumMesodermAnimalsConstrictionDrosophilaMorphogenesisMusclesCalciumcalcium signalingdevelopmental biologyD. melanogasterhox geneslight sheet microscopymesodermmorphogenesisvisceral organ

Identifiers

PMID35593701
PMCPMC9275821

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.