Evidence map›Paper›PMID 35617426›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Identification of

Ha Eun Kong, Junghwa Lim, Alexander Linsalata, Yunhee Kang, Indranil Malik, Emily G Allen, Yiqu Cao, Lisa Shubeck, Rich Johnston, Yanting Huang and 13 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Decoding Nucleotide Repeat Expansion Diseases: Novel Insights fromInternational journal of molecular sciences · 2024
    Review
  7. Article
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Ha Eun KongDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.ORCID 0000-0002-2630-0488
Junghwa LimDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Alexander LinsalataDepartment of Neurology, University of Michigan, Veteran's Affairs Medical Center, Ann Arbor, MI 48109.
Yunhee KangDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Indranil MalikDepartment of Neurology, University of Michigan, Veteran's Affairs Medical Center, Ann Arbor, MI 48109.
Emily G AllenDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Yiqu CaoDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Lisa ShubeckDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Rich JohnstonDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Yanting HuangDepartment of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, GA 30322.
Yanghong GuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030.ORCID 0000-0001-6534-9957
Xiangxue GuoDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.ORCID 0000-0001-6956-8225
Michael E ZwickDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Zhaohui QinDepartment of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, GA 30322.
Thomas S WingoDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.ORCID 0000-0002-7679-6282
Jorge JuncosDepartment of Neurology, School of Medicine, Emory University, Atlanta, GA 30322.
David L NelsonDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030.ORCID 0000-0002-1522-0124
Michael P EpsteinDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
David J CutlerDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Peter K ToddDepartment of Neurology, University of Michigan, Veteran's Affairs Medical Center, Ann Arbor, MI 48109.ORCID 0000-0003-4781-6376
Stephanie L ShermanDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Stephen T WarrenDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.
Peng JinDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA 30322.ORCID 0000-0001-6137-6659

Funding

Molecular Basis of rCGG-Mediated NeurodegenerationR01NS051630 · NINDS · EMORY UNIVERSITY · PI NELSON, DAVID LOREN · 2006 to 2023
$9.8M
Preclinical CoreP50HD103573 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Mark D Shen · 2020 to 2026
$9.7M
Recruitment CoreU54NS091859 · NINDS · EMORY UNIVERSITY · PI WARREN, STEPHEN T. · 2014 to 2019
$9.1M
The FMR1 CGG repeat as functional element and therapeutic target in Fragile X associated disordersP50HD104463 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI ALLEN, EMILY GRAVES · 2020 to 2024
$9.0M
Dynamic DNA Modifications in Brain and DiseasesR35NS111602 · NINDS · EMORY UNIVERSITY · PI PENG JIN · 2019 to 2026
$6.5M
Institute for Clinical and Translational ResearchUL1TR000424 · NCATS · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2012 to 2012
$6.0M
Hexanucleotide repeat translation in ALS and Frontotemporal DementiaR01NS099280 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Peter K Todd · 2016 to 2026
$4.9M
CGG repeat associated translation in Fragile X-associated Tremor/Ataxia Syndrome-Diversity SupplementR01NS086810 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TODD, PETER K · 2014 to 2024
$4.1M
Understanding the molecular mechanisms of Depression and Psychological Well-being in Alzheimer's diseaseR01AG056533 · NIA · EMORY UNIVERSITY · PI WINGO, ALIZA PHAM, WINGO, THOMAS SPURGEON · 2017 to 2021
$3.9M
Computational Prediction and Functional Validation of Novel Epigenetic Risk Loci in Alzheimer's DiseaseR56AG062256 · NIA · EMORY UNIVERSITY · PI JIN, PENG, QIN, ZHAOHUI · 2018 to 2018
$788k
Elucidating the Role of Plasma Cholesterol in Alzheimer's Disease using Mendelian RandomizationR56AG062633 · NIA · EMORY UNIVERSITY · PI WINGO, THOMAS SPURGEON · 2019 to 2019
$711k
Bypassing cellular stress pathways in frontotemporal dementia and ALSI01BX004842 · VA · VETERANS HEALTH ADMINISTRATION · PI TODD, PETER K · 2020 to 2023
–
BLRD VA I01 BX004842NCATS NIH HHS UL1 TR000424NIA NIH HHS R01 AG056533NIA NIH HHS R56 AG062633NICHD NIH HHS P50 HD103573NICHD NIH HHS P50 HD104463NINDS NIH HHS R01 NS051630NINDS NIH HHS R01 NS086810NINDS NIH HHS R01 NS099280NINDS NIH HHS R35 NS111602NINDS NIH HHS U54 NS091859
6 · The paper itself

Abstract

Fragile X–associated tremor/ataxia syndrome (FXTAS) is a debilitating late-onset neurodegenerative disease in premutation carriers of the expanded CGG repeat in FMR1 that presents with a spectrum of neurological manifestations, such as gait ataxia, intention tremor, and parkinsonism [P. J. Hagerman, R. J. Hagerman, Ann. N. Y. Acad. Sci. 1338, 58–70 (2015); S. Jacquemont et al., JAMA 291, 460–469 (2004)]. Here, we performed whole-genome sequencing (WGS) on male premutation carriers (CGG55–200) and prioritized candidate variants to screen for candidate genetic modifiers using a Drosophila model of FXTAS. We found 18 genes that genetically modulate CGG-associated neurotoxicity in Drosophila, such as Prosbeta5 (PSMB5), pAbp (PABPC1L), e(y)1 (TAF9), and CG14231 (OSGEPL1). Among them, knockdown of Prosbeta5 (PSMB5) suppressed CGG-associated neurodegeneration in the fly as well as in N2A cells. Interestingly, an expression quantitative trait locus variant in PSMB5, PSMB5rs11543947-A, was found to be associated with decreased expression of PSMB5 and delayed onset of FXTAS in human FMR1 premutation carriers. Finally, we demonstrate evidence that PSMB5 knockdown results in suppression of CGG neurotoxicity via both the RAN translation and RNA-mediated toxicity mechanisms, thereby presenting a therapeutic strategy for FXTAS.

Indexed as

AtaxiaFragile X SyndromeProteasome Endopeptidase ComplexTremorAnimalsDisease Models, AnimalDrosophila melanogasterFragile X Messenger Ribonucleoprotein 1HumansMaleFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1Proteasome Endopeptidase ComplexPSMB5 protein, humanFMR1fragile X syndromeFXTASpremutationPSMB5

Identifiers

PMID35617426
PMCPMC9295734

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.