Evidence map›Paper›PMID 35630433›Full record

ArticleMicroorganisms2022

Development of a Highly Sensitive Nested PCR and Its Application for the Diagnosis of Cutaneous Leishmaniasis in Sri Lanka.

Nirmitha Lalindi De Silva, Viraji Nefertiti Hiromel De Silva, Arachchige Theja Hemapala Deerasinghe, Upeksha Lakmini Rathnapala, Makoto Itoh, Hidekazu Takagi, Mirani Vasanthamala Weerasooriya, Hirotomo Kato, Thishan Channa Yahathugoda

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Dual detection and novel genotypes ofFrontiers in veterinary science · 2026
    Article
  3. Molecular Detection ofAdvanced biomedical research · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Diagnostic Tools for Cutaneous Leishmaniasis Caused byDiagnostics (Basel, Switzerland) · 2023
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Nirmitha Lalindi De SilvaDepartment of Parasitology, Faculty of Medicine, University of Ruhuna, Galle 80000, Sri Lanka.ORCID 0000-0001-8895-5415
Viraji Nefertiti Hiromel De SilvaBase Hospital Tangalle, Tangalle 82200, Sri Lanka.
Arachchige Theja Hemapala DeerasingheDistrict General Hospital Hambantota, Hambantota 82000, Sri Lanka.
Upeksha Lakmini RathnapalaSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia.ORCID 0000-0001-6259-616X
Makoto ItohDepartment of Microbiology and Immunology, Aichi Medical University School of Medicine, Aichi 480-1195, Japan.
Hidekazu TakagiDepartment of Microbiology and Immunology, Aichi Medical University School of Medicine, Aichi 480-1195, Japan.
Mirani Vasanthamala WeerasooriyaDepartment of Parasitology, Faculty of Medicine, University of Ruhuna, Galle 80000, Sri Lanka.
Hirotomo KatoDivision of Medical Zoology, Department of Infection and Immunity, Jichi Medical University, Tochigi 329-0498, Japan.ORCID 0000-0001-5429-9536
Thishan Channa YahathugodaDepartment of Parasitology, Faculty of Medicine, University of Ruhuna, Galle 80000, Sri Lanka.ORCID 0000-0003-4981-8914
University of Ruhuna · LKAichi Medical University · JPJichi Medical University · JPThe University of Melbourne · AU

Funding

Faculty of Medicine, University of Ruhuna, Sri Lanka, and Galle Medical Association, Sri Lanka Research Grant 2019Ministry of Education, Culture, Sports, Science and Technology 17H0168, 15H05283
6 · The paper itself

Abstract

The recent surge in cutaneous leishmaniasis (CL) in Sri Lanka has rendered clinical diagnosis difficult; thus, laboratory confirmation is indispensable. A modified (two novel inner primers to detect CL caused by Leishmania donovani) nested Internal Transcribed Spacer-1 (ITS1) PCR-Restriction Fragment Length Polymorphism (RFLP) method was developed and tested. The sensitivity of the modified nested PCR was tested using serial dilutions (103 to 10−2) of the DNA extract of a cultured L. donovani DD8 strain. Patients (n = 194) from Southern Sri Lanka were examined clinically, microscopically (Slit Skin Smear-SSS) and using the modified nested PCR. The modified nested PCR detected 2.55 fg of parasite DNA compared to ITS1 PCR (25 fg) and detected more cases than SSS (94.3% vs. 77.3%; p < 0.01). The RFLP pattern was L. donovani in all cases. The modified nested PCR performed well in clinically doubtful lesions (95% by PCR vs. 60% by SSS; p < 0.01), ulcerated nodules (91% vs. 71.8%; p < 0.01) and plaques (100% vs. 66.7%; p < 0.01). SSS demonstrated sensitivity (80.9%), specificity (81.8%), PPV (98.7%) and NPV (20.5%) against modified PCR. Low parasite loads and atypical lesions can be diagnosed by the proposed method with higher accuracy.

Indexed as

cutaneous leishmaniasisITSPCR-RFLPSri Lanka

Identifiers

PMID35630433
PMCPMC9145043
OpenAlexW4229454076

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.