Evidence map›Paper›PMID 35632818›Full record

ReviewViruses2022

The Role of the Flavivirus Replicase in Viral Diversity and Adaptation.

Haley S Caldwell, Janice D Pata, Alexander T Ciota

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. West Nile virus unmasked: from gene variability to future challenges.Frontiers in cellular and infection microbiology · 2025
    Review
  8. Article
  9. Review
  10. Article
  11. Intrinsic factors driving mosquito vector competence and viral evolution: a review.Frontiers in cellular and infection microbiology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Haley S CaldwellThe Arbovirus Laboratory, Wadsworth Center, New York State Department of Health, Slingerlands, NY 12159, USA.
Janice D PataDepartment of Biomedical Sciences, State University of New York at Albany, School of Public Health, Rensselaer, NY 12144, USA.
Alexander T CiotaThe Arbovirus Laboratory, Wadsworth Center, New York State Department of Health, Slingerlands, NY 12159, USA.
University at Albany, State University of New York · USNew York State Department of Health · US

Funding

Structural and Mechanistic Studies of Error-Prone PolymerasesR01GM080573 · NIGMS · WADSWORTH CENTER · PI PATA, JANICE D · 2008 to 2018
$2.6M
Modeling the influence of temperature on the evolution of vector-virus interactionsR01AI168097 · NIAID · WADSWORTH CENTER · PI Alexander Timothy Ciota · 2022 to 2026
$2.4M
Evaluation of a Behavioral Intervention to Promote Food Allergy Self-Management Among Early AdolescentsR01AI168090 · NIAID · CHILDREN'S RESEARCH INSTITUTE · PI Linda Jones Herbert · 2023 to 2026
$2.1M
Evaluating the consequences of genotype displacement and geographic bias of West Nile virus in New York StateR21AI146856 · NIAID · WADSWORTH CENTER · PI CIOTA, ALEXANDER TIMOTHY · 2020 to 2021
$378k
NIAID NIH HHS R01 AI168090NIAID NIH HHS R01 AI168097NIAID NIH HHS R21 AI146856NIGMS NIH HHS R01 GM080573NIH HHS AI146856NIH HHS AI1680907NIH HHS GM080573
6 · The paper itself

Abstract

Flaviviruses include several emerging and re-emerging arboviruses which cause millions of infections each year. Although relatively well-studied, much remains unknown regarding the mechanisms and means by which these viruses readily alternate and adapt to different hosts and environments. Here, we review a subset of the different aspects of flaviviral biology which impact host switching and viral fitness. These include the mechanism of replication and structural biology of the NS3 and NS5 proteins, which reproduce the viral genome; rates of mutation resulting from this replication and the role of mutational frequency in viral fitness; and the theory of quasispecies evolution and how it contributes to our understanding of genetic and phenotypic plasticity.

Indexed as

FlavivirusAdaptation, PhysiologicalGenome, ViralNucleotidyltransferasesRNA-Dependent RNA PolymeraseNucleotidyltransferasesRNA-Dependent RNA PolymerasearbovirusesfidelityNS3NS5quasispeciesreplication complexRNA dependent RNA polymerase

Identifiers

PMID35632818
PMCPMC9143365
OpenAlexW4280602122

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.