Evidence map›Paper›PMID 35648444›Full record

ArticleNucleic acids research2022

Structural basis for interaction between CLAMP and MSL2 proteins involved in the specific recruitment of the dosage compensation complex in Drosophila.

Evgeniya Tikhonova, Sofia Mariasina, Sergey Efimov, Vladimir Polshakov, Oksana Maksimenko, Pavel Georgiev, Artem Bonchuk

Abstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. N-terminus ofeLife · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Dosage Compensation inInternational journal of molecular sciences · 2022
    Review
  8. Dimerization Activity of a Disordered N-Terminal Domain fromInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Evgeniya TikhonovaDepartment of the Control of Genetic Processes, Institute of Gene Biology, Moscow 119334, Russia.
Sofia MariasinaCenter for Magnetic Tomography and Spectroscopy, Faculty of Fundamental Medicine, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.
Sergey EfimovNMR Laboratory, Institute of Physics, Kazan Federal University, Kazan 420008, Russia.
Vladimir PolshakovCenter for Magnetic Tomography and Spectroscopy, Faculty of Fundamental Medicine, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.ORCID 0000-0002-3216-5737
Oksana MaksimenkoCenter for Precision Genome Editing and Genetic Technologies for Biomedicine, Institute of Gene Biology, Moscow 119334, Russia.ORCID 0000-0003-3502-0303
Pavel GeorgievDepartment of the Control of Genetic Processes, Institute of Gene Biology, Moscow 119334, Russia.ORCID 0000-0002-6509-3194
Artem BonchukDepartment of the Control of Genetic Processes, Institute of Gene Biology, Moscow 119334, Russia.ORCID 0000-0002-0948-0640

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcriptional regulators select their targets from a large pool of similar genomic sites. The binding of the Drosophila dosage compensation complex (DCC) exclusively to the male X chromosome provides insight into binding site selectivity rules. Previous studies showed that the male-specific organizer of the complex, MSL2, and ubiquitous DNA-binding protein CLAMP directly interact and play an important role in the specificity of X chromosome binding. Here, we studied the highly specific interaction between the intrinsically disordered region of MSL2 and the N-terminal zinc-finger C2H2-type (C2H2) domain of CLAMP. We obtained the NMR structure of the CLAMP N-terminal C2H2 zinc finger, which has a classic C2H2 zinc-finger fold with a rather unusual distribution of residues typically used in DNA recognition. Substitutions of residues in this C2H2 domain had the same effect on the viability of males and females, suggesting that it plays a general role in CLAMP activity. The N-terminal C2H2 domain of CLAMP is highly conserved in insects. However, the MSL2 region involved in the interaction is conserved only within the Drosophila genus, suggesting that this interaction emerged during the evolution of a mechanism for the specific recruitment of the DCC on the male X chromosome in Drosophilidae.

Indexed as

Drosophila melanogasterAnimalsDNA-Binding ProteinsDosage Compensation, GeneticDrosophila ProteinsFemaleMaleNuclear ProteinsProtein BindingTranscription FactorsZincCLAMP protein, DrosophilaDNA-Binding ProteinsDrosophila Proteinsmsl-2 protein, DrosophilaNuclear ProteinsTranscription FactorsZinc

Identifiers

PMID35648444
PMCPMC9226498

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.