Evidence map›Paper›PMID 35655915›Full record

ArticleDisease markers2022

Partial-Methylated HeyL Promoter Predicts the Severe Illness in Egyptian COVID-19 Patients.

Hewida H Fadel, Mohammad Abd El-Rahman Ahmed, Kareem Mahamoud Gharbeya, Mohammed Ahmed Khamis Mohamed, Mohamed N Roushdy, Reda Almiry

Open access · hybridAbstract read
In one paragraph

Article in Disease markers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Hewida H FadelDepartment of Medical Laboratory Technology, Faculty of Allied Medical Science, Pharos University, Alexandria, Egypt.ORCID https://orcid.org/0000-0002-6696-0405
Mohammad Abd El-Rahman AhmedDepartment of Clinical Pathology, Military Medical Academy, Alexandria Armed Forces Hospital, Egypt.ORCID https://orcid.org/0000-0001-6079-2984
Kareem Mahamoud GharbeyaCritical Care Consultant at Alexandria Armed Forces Hospital, Egypt.ORCID https://orcid.org/0000-0001-5553-8842
Mohammed Ahmed Khamis MohamedPulmonary Consultant at Alexandria Armed Forces Hospital, Egypt.ORCID https://orcid.org/0000-0001-5634-920X
Mohamed N RoushdyDepartment of Medical Microbiology and Clinical Immunology, Military Medical Academy, Alexandria Armed Forces Hospital, Egypt.ORCID https://orcid.org/0000-0002-3659-3616
Reda AlmiryMolecular and Diagnostic Microbiology, Molecular Microbiologist Consultant at Alex Armed Forces Hospital, Egypt.ORCID https://orcid.org/0000-0003-4880-6874
Armed Forces College of Medicine · EGMilitary Medical Academy · EGPharos University in Alexandria · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: To date (14 January 2022), the incidence and related mortality rate of COVID-19 in America, Europe, and Asia despite administrated of billions doses of many approved vaccines are still higher than in Egypt. Epigenetic alterations mediate the effects of environmental factors on the regulation of genetic material causing many diseases. Objective: We aimed to explore the methylation status of HeyL promoter, a downstream transcription factor in Notch signal, an important regulator of cell proliferation and differentiation blood, pulmonary epithelial, and nerves cells. Methods: Our objective was achieved by DNA sequencing of the product from methyl-specific PCR of HeyL promoter after bisulfite modification of DNA extracted from the blood samples of 30 COVID-19 patients and 20 control health subjects and studying its association with clinical-pathological biomarkers. Results: We found that the HeyL promoter was partial-methylated in Egyptian COVID-19 patients and control healthy subjects compared to full methylated one that was published in GenBank. We identified unmethylated CpG (TG) flanking the response elements within HeyL promoter in Egyptian COVID-19 patients and control healthy subjects vs. methylated CpG (CG) in reference sequence (GenBank). Also, we observed that the frequency of partial-methylated HeyL promoter was higher in COVID-19 patients and associated with aging, fever, severe pneumonia, ageusia/anosmia, and dry cough compared to control healthy subjects. Conclusion: We concluded that hypomethylated HeyL promoter in Egyptian population may facilitate the binding of transcription factors to their binding sites, thus enhancing its regulatory action on the blood, pulmonary epithelium, and nerves cells in contrast to full methylated one that was published in GenBank; thus, addition of demethylating agents to the treatment protocol of COVID-19 may improve the clinical outcomes. Administration of therapy must be based on determination of methylation status of HeyL, a novel prognostic marker for severe illness in COVID-19 patients.

Indexed as

Basic Helix-Loop-Helix ProteinsCOVID-19Repressor ProteinsBase SequenceDNA MethylationEgyptHumansPromoter Regions, GeneticBasic Helix-Loop-Helix ProteinsHEYL protein, humanRepressor Proteins

Identifiers

PMID35655915
PMCPMC9153385
OpenAlexW4281607106

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.