Evidence map›Paper›PMID 35698238›Full record

ArticleParasites & vectors2022

Genetic diversity of Plasmodium vivax reticulocyte binding protein 2b in global parasite populations.

Xuexing Zhang, Haichao Wei, Yangminghui Zhang, Yan Zhao, Lin Wang, Yubing Hu, Wang Nguitragool, Jetsumon Sattabongkot, John Adams, Liwang Cui and 2 more

Abstract read
In one paragraph

Article in Parasites & vectors, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Observational
  2. Genetic Diversity and Population Dynamics ofVeterinary medicine international · 2024
    Article
  3. Analysis of genetic diversity and population structure ofFrontiers in veterinary science · 2023
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Xuexing ZhangDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Haichao WeiDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Yangminghui ZhangDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Yan ZhaoDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Lin WangDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Yubing HuDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Wang NguitragoolMahidol Vivax Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.
Jetsumon SattabongkotMahidol Vivax Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.
John AdamsCollege of Public Health, Global Health Infectious Disease Research (GHIDR) Program, Tampa, FL, USA.
Liwang CuiCollege of Public Health, Global Health Infectious Disease Research (GHIDR) Program, Tampa, FL, USA.
Yaming CaoDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China. ymcao@cmu.edu.cn.
Qinghui WangDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China. gaihui2010@163.com.

Funding

Southeast Asia Malaria Research CenterU19AI089672 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI CUI, LIWANG · 2010 to 2023
$28.9M
Accelerating discovery of an efficacious Plasmodium vivax multivalent multi-stage vaccineU01AI155361 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI ADAMS, JOHN H · 2021 to 2025
$4.8M
National Institute of Allergy and Infectious Diseases U01AI155361National Institute of Allergy and Infectious Diseases U19AI089672NIAID NIH HHS U01 AI155361NIAID NIH HHS U19 AI089672
6 · The paper itself

Abstract

backgroundPlasmodium vivax reticulocyte binding protein 2b (PvRBP2b) plays a critical role in parasite invasion of reticulocytes by binding the transferrin receptor 1. PvRBP2b is a vaccine candidate based on the negative correlation between antibody titers against PvRBP2b recombinant proteins and parasitemia and risk of vivax malaria. The aim of this study was to analyze the genetic diversity of the PvRBP2b gene in the global P. vivax populations.

methodsNear full-length PvRBP2b nucleotide sequences (190-8349 bp) were obtained from 88 P. vivax isolates collected from the China-Myanmar border (n = 44) and Thailand (n = 44). An additional 224 PvRBP2b sequences were retrieved from genome sequences from parasite populations worldwide. The genetic diversity, neutral selection, haplotype distribution and genetic differentiation of PvRBP2b were examined.

resultsThe genetic diversity of PvRBP2b was distributed unevenly, with peak diversity found in the reticulocyte binding region in the N-terminus. Neutrality analysis suggested that this region is subjected to balancing selection or population bottlenecks. Several amino acid variants were found in all or nearly all P. vivax endemic regions. However, the critical residues responsible for reticulocyte binding were highly conserved. There was substantial population differentiation according to the geographical separation. The distribution of haplotypes in the reticulocyte binding region varied among regions; even the two major haplotypes Hap_6 and Hap_8 were found in only five populations.

conclusionsOur data show considerable genetic variations of PvRBPb in global parasite populations. The geographic divergence may pose a challenge to PvRBP2b-based vaccine development.

Indexed as

Malaria, VivaxParasitesAnimalsAntigens, ProtozoanGenetic VariationHaplotypesPlasmodium vivaxProtozoan ProteinsReticulocytesSelection, GeneticAntigens, ProtozoanProtozoan ProteinsGenetic diversityPlasmodium vivaxPvRBP2bVaccine

Identifiers

PMID35698238
PMCPMC9191549

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.