Evidence map›Paper›PMID 35698786›Full record

ArticleEMBO molecular medicine2022

Functional divergence of the two Elongator subcomplexes during neurodevelopment.

Monika Gaik, Marija Kojic, Megan R Stegeman, Tülay Öncü-Öner, Anna Kościelniak, Alun Jones, Ahmed Mohamed, Pak Yan Stefanie Chau, Sazia Sharmin, Andrzej Chramiec-Głąbik and 19 more

Open access · goldAbstract read
In one paragraph

Article in EMBO molecular medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Epigenetic modifications of DNA and RNA in Alzheimer's disease.Frontiers in molecular neuroscience · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. AtELP4 a subunit of the Elongator complex inFrontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 9 institutions in 5 countries.

Monika Gaik *Malopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.ORCID 0000-0003-4939-3821
Marija Kojic *The University of Queensland Diamantina Institute, Faculty of Medicine, The University of Queensland, Woolloongabba, QLD, Australia.ORCID 0000-0001-6437-283X
Megan R StegemanThe University of Queensland Diamantina Institute, Faculty of Medicine, The University of Queensland, Woolloongabba, QLD, Australia.
Tülay Öncü-ÖnerDepartment of Medical Biology and Genetics, Faculty of Medicine, Dokuz Eylül University, İzmir, Turkey.ORCID 0000-0001-6180-5409
Anna KościelniakMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.
Alun JonesInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, Australia.ORCID 0000-0002-9819-9163
Ahmed MohamedBioinformatics Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Pak Yan Stefanie ChauSchool of Biomedical Sciences, The University of Queensland, Brisbane, QLD, Australia.
Sazia SharminSchool of Biomedical Sciences, The University of Queensland, Brisbane, QLD, Australia.
Andrzej Chramiec-GłąbikMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.ORCID 0000-0002-3544-7211
Paulina IndykaMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.
Michał RawskiMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.
Anna BielaMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.
Dominika DoboszMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.
Amanda MillarThe University of Queensland Diamantina Institute, Faculty of Medicine, The University of Queensland, Woolloongabba, QLD, Australia.
Vann ChauDepartment of Paediatrics (Neurology), The Hospital for Sick Children and University of Toronto, Toronto, ON, Canada.
Aycan ÜnalpDepartment of Pediatric Neurology, Dr. Behçet Uz Children's Hospital, İzmir, Turkey.ORCID 0000-0002-3611-5059
Michael PiperSchool of Biomedical Sciences, The University of Queensland, Brisbane, QLD, Australia.ORCID 0000-0002-6759-2560
Mark C BellinghamSchool of Biomedical Sciences, The University of Queensland, Brisbane, QLD, Australia.
Evan E EichlerDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Deborah A NickersonDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Handan GüleryüzDepartment of Pediatric Radiology, School of Medicine, Dokuz Eylül University, İzmir, Turkey.
Nour El Hana AbbassiMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.ORCID 0000-0002-0385-7953
Konrad JazgarMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.ORCID 0000-0002-8440-9182
Melissa J DavisThe University of Queensland Diamantina Institute, Faculty of Medicine, The University of Queensland, Woolloongabba, QLD, Australia.
Saadet Mercimek-AndrewsThe Hospital for Sick Children, Toronto, ON, Canada.ORCID 0000-0001-8396-6764
Sultan CingözDepartment of Medical Biology and Genetics, Faculty of Medicine, Dokuz Eylül University, İzmir, Turkey.ORCID 0000-0002-4112-9850
Brandon J WainwrightThe University of Queensland Diamantina Institute, Faculty of Medicine, The University of Queensland, Woolloongabba, QLD, Australia.
Sebastian GlattMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.ORCID 0000-0003-2815-7133
Jagiellonian University · PLThe University of Queensland · AUDokuz Eylül University · TRDr. Behçet Uz Çocuk Hastalıkları Hastanesi · TRHoward Hughes Medical Institute · USThe University of Melbourne · AUUniversity of Alberta · CAUniversity of Toronto · CAUniversity of Washington · US

Funding

UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
Sporadic Mutations and Autism Spectrum DisordersR01MH101221 · NIMH · UNIVERSITY OF WASHINGTON · PI EICHLER, EVAN · 2013 to 2025
$9.2M
NHGRI Genome Sequencing Program Coordinating CenterU24HG008956 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI BUYSKE, STEVEN G, MATISE, TARA C. · 2016 to 2020
$4.9M
NHGRI NIH HHS U24 HG008956NHGRI NIH HHS UM1 HG006493NIMH NIH HHS R01 MH101221
6 · The paper itself

Abstract

The highly conserved Elongator complex is a translational regulator that plays a critical role in neurodevelopment, neurological diseases, and brain tumors. Numerous clinically relevant variants have been reported in the catalytic Elp123 subcomplex, while no missense mutations in the accessory subcomplex Elp456 have been described. Here, we identify ELP4 and ELP6 variants in patients with developmental delay, epilepsy, intellectual disability, and motor dysfunction. We determine the structures of human and murine Elp456 subcomplexes and locate the mutated residues. We show that patient-derived mutations in Elp456 affect the tRNA modification activity of Elongator in vitro as well as in human and murine cells. Modeling the pathogenic variants in mice recapitulates the clinical features of the patients and reveals neuropathology that differs from the one caused by previously characterized Elp123 mutations. Our study demonstrates a direct correlation between Elp4 and Elp6 mutations, reduced Elongator activity, and neurological defects. Foremost, our data indicate previously unrecognized differences of the Elp123 and Elp456 subcomplexes for individual tRNA species, in different cell types and in different key steps during the neurodevelopment of higher organisms.

Indexed as

RNA, TransferSaccharomyces cerevisiae ProteinsAnimalsMiceProtein SubunitsProtein SubunitsRNA, TransferSaccharomyces cerevisiae ProteinsElongator complexElp4Elp6neurodevelopmenttRNA modification

Identifiers

PMID35698786
PMCPMC9260213
OpenAlexW4282843208

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.