Evidence map›Paper›PMID 35702072›Full record

ArticleAmerican journal of translational research2022

Application of MRT-qPCR for pathogen detection of lower respiratory tract infection.

Shiyi Huang, Jiangpo Chen, Jian Wang, Yuqi Zhao, Cong Jin, Yuxiang Wang, Mengmeng Lu, Wenxuan Wang, Qingzeng Qian, Tieliang Pang

Open access · greenAbstract read
In one paragraph

Article in American journal of translational research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Shiyi HuangSchool of Public Health, North China University of Science and Technology Tangshan 063210, Hebei, P. R. China.
Jiangpo ChenBiotecnovo (Langfang) Medical Lab Co, Ltd Langfang 065000, Hebei, P. R. China.
Jian WangDepartment of Paediatrics, Cangzhou Maternal and Child Health Care Hospital Cangzhou 061000, Hebei, P. R. China.
Yuqi ZhaoDepartment of Paediatrics, Cangzhou Central Hospital Cangzhou 061000, Hebei, P. R. China.
Cong JinSchool of Public Health, North China University of Science and Technology Tangshan 063210, Hebei, P. R. China.
Yuxiang WangSchool of Public Health, North China University of Science and Technology Tangshan 063210, Hebei, P. R. China.
Mengmeng LuBiotecnovo (Langfang) Medical Lab Co, Ltd Langfang 065000, Hebei, P. R. China.
Wenxuan WangBiotecnovo (Langfang) Medical Lab Co, Ltd Langfang 065000, Hebei, P. R. China.
Qingzeng QianSchool of Public Health, North China University of Science and Technology Tangshan 063210, Hebei, P. R. China.
Tieliang PangBiotecnovo (Langfang) Medical Lab Co, Ltd Langfang 065000, Hebei, P. R. China.
Langfang Normal University · CNNorth China University of Science and Technology · CNCangzhou Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo analyze and clarify the application value of multiplex quantitative real-time PCR (MRT-PCR) assay in detecting pathogens involved in lower respiratory tract infection (LRTI), so as to realize accurate and rapid detection of respiratory pathogens.

methodsBronchial alveolar lavage fluid (BALF) specimens from 186 patients with LRTI collected in the Cangzhou Central Hospital from June 2020 to September 2021 were analyzed retrospectively. Pathogen detection was performed by both MRT-PCR and direct immunofluorescence assay (DFA), and the results of different inspection methods were compared.

resultsAmong the seven pathogens detected by MRT-PCR, 140 positive specimens were identified out of the 186 patients, with the top three pathogens with the highest positive rates being influenza A virus (Flu A; 36 [19.35%]), respiratory syncytial virus (RSV; 30 [16.13%]) and human adenovirus (HAdV; 23 [12.37%]), and the pathogen with the lowest positive rate being parainfluenza virus type 3 (PIV3; 9 [4.84%]). DFA showed 110 pathogen-positive specimens, and the top three pathogens with the highest positive rates were Flu A (30 [16.13%]), HAdV (21 [11.29%]) and RSV (19 [10.22%]). The total sensitivity and accuracy of MRT-PCR assay were 93.01% and 98.69% respectively, which were statistically higher than those of 48.45% and 91.24% of DFA (P<0.05). The two inspection methods showed no significant difference in specificity (99.4% for MRT-PCR assay and 97.28% for DFA) (P>0.05).

conclusionsMRT-PCR is rapid, accurate and specific in detecting pathogens of LRTI, which significantly improves the detection rate, with reliable performance and it has high clinical application value.

Indexed as

direct immunofluorescencelower respiratory tract infectionMultiplex quantitative real-time PCRpathogenspecificity

Identifiers

PMID35702072
PMCPMC9185067
OpenAlexW4285744755

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.